| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is kefC [C]
Identifier: 193212743
GI number: 193212743
Start: 1200599
End: 1202842
Strand: Direct
Name: kefC [C]
Synonym: Cpar_1088
Alternate gene names: 193212743
Gene position: 1200599-1202842 (Clockwise)
Preceding gene: 193212741
Following gene: 193212744
Centisome position: 52.45
GC content: 53.97
Gene sequence:
>2244_bases ATGGAGCATTACTACGTTGAACTTCTTCAGGAATTTCAGTTACCGCTGACCAATCCGGTGCTGATTTTTTCGCTCGTGTT GTTCATCATTTTGCTCTCGCCTATCGTCCTCAAGCGTTTTAATATTCCGGGAACGGTCGGTCTGATTCTCTCCGGCGTGC TGATTGGCCCCTATGCCCTGAATCTGCTTGAAAAAAGCTCGGCGGTGGATCTGTTTTCGACCATCGGCCTGCTTTACATC ATGTTCATTGCCGGGGCAGAACTTCAGGTCAACGAGCTGAAGCGAAACCGCAATCAAAGCCTCCTGTTTGGCCTCCTGAC CCTCATCGTGCCTATCGTTGCGGTTTATCCGGTGTGCCGCTATTTACTCAATTACAATGTGAGTGCGAGCCTGCTTACGG CCAGCATGCTTGCGACCCATACGCTGGTAGCTTATCCGATCGTCAACCGCATGGGCATTGCAAAAAACCAGGCCGTGCCC ATAACGGTGGCCGGCACGATTCTGACCGACACCGCTGTCCTGCTGCTGCTTGCAGTCATCATCGGCTACAGTCAGGGCAA TCTCACTCAGGAGTTCTGGCTCCACCTCGCCATTTCGCTCACGATTTTCACGATGATCGTCTTCATCGTACTGCCGTTTA TCGCGCGTTGGTTCTTTACCAAGCTCGAAAACGAGAAGCATGCGCACTACATCTTTGTGCTTTCGGCCGTCTTTTTCTCG GCCTTCCTCTCCAGAGTCGCCGGGCTTGAACCGATTGTCGGAGCATTCGCTGCGGGCCTGGCGCTCAACCGGCTCATTCC GAACTCTTCAGCTCTGATGAACCGCATCGAATTTATCGGCAATTCCCTGTTCATCCCGTTTTTCCTGATCAGCGTGGGAA TGCTGGTGGATCTCAGGGTGATCCTGAGCGGCCCGATGACCCTCATCATCGCAGCGTTGCTGACGGTGGTGGCGCTTGCA GGAAAATGGCTCCCGGCATGGGTGACCCAGAAGCTGTTCAAGTTGTCGGCAGCGCAACGGCAGCTGATCTTCGGATTGAG CAGCTCCCGGGCGGCGGCCACCATCGCGATCGTGCTGGTCGGCTATCAGGCTCGTATTCTCGACCTGAACATTCTGAACG CTACCATCATTCTGATTCTGGTGACGTGCATCGTAGGCTCAATGGTCACCGAAAAAGCCGCCAAAGAGATCGTCGTCGAG GAGAGCCAGGCAAGTCCGGTAGATGAGAGTGATGAGGCGAGCTTCTCCGAGCAGATTTTGCTACCGATCGCCGAAGGGTT GCCCTCTGAACGGGTACTTGAATTTGCGGTGCTCATCAGGGAGAAACGCTCGGCCAAGCCGCTGATTCTGCTGAGTGTGG TGCCCAACGACCACGAGGCTGAGTTGAACATGAAAAAATCCAAAAAGGCGCTGGAGCCGATGATCAACTACGCGGCTTCG TTCGATACGAAACTCGATATCGTGGCCACAATCGACTATAACGTCAGCAGCGGCATCAGTCGTATGGCAAGAGAGCTGCA AGCCGACCTGGTGGTGTATGGCTGGCCACTGCACAGAGGTTTCATTGCCCGGCTGATCAACGATTCGGCAGAAAGCATCG TCAACTGCACCAGCAAAACCACCATCATCTGCCAAATCACCCAACCGCTCGCTTTGCATCGCCGGTTGGTGGTGATCATT CCGCCGCTGGCCGAAATGGAGAAAGGCTTCGAGCAGTGGGTCGCGAAAATGACGCTGCTGTCACTGGAGCTGAGCATACC GATGGAACTCCACTGCAACAGCAAAACCCACGCCGCCGTGCTCGACAGCTTCGACTCGATGCAGTCGGCGCCCAAGTTGC TTTTCGAGCCGATGAAAAATGCACGCGACTGGGAAAACCTGTCCAGACAACGCAAGCGCTTCAAGGATGACGACATCATC GTGCTGGTCAGCGCCCGAAAGGATTCGCTTTCATACAAACCCTATTTCGACCAGAGCCCGGAACAGCTCGAAAAGCATTT CGGAGGCATCAGCAAAATCATGATCTACCCGGCCAGCTACGGTGCAGCCAATATTGCTGAAGGGTATGTTGACGTGGTCG TACCGGAACCGATTCGCATCGGCGCTTCGGCAATTCGGAAAGTCGGAAACGAGCTCGGTCTGTTCCTGAAAAAAAATCAG CAGCAGATCAGAAAAAAGATTCGCGATAAACGTCAAAACCAGCAAAAAACGCAGGATACCACAGAAAAGGGCGACAAGCC GTAA
Upstream 100 bases:
>100_bases TCCCCCGCTTTGTCCACCCATTACCTGTCAGCGCATTCGGATAAATTGTTTAAATTTCAGCGATACCACGATCCGAAAAC CTTGAAGCGGACTCGCACGC
Downstream 100 bases:
>100_bases GGTTATTTCACAAAATGGTCGTATCGTTCAATTTATATGTCAGGACAAAGGCACTGAACACCCATTACCGGTATATGCGA GCAGAACATCTCTTCCGGCC
Product: sodium/hydrogen exchanger
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: MjNapA [H]
Number of amino acids: Translated: 747; Mature: 747
Protein sequence:
>747_residues MEHYYVELLQEFQLPLTNPVLIFSLVLFIILLSPIVLKRFNIPGTVGLILSGVLIGPYALNLLEKSSAVDLFSTIGLLYI MFIAGAELQVNELKRNRNQSLLFGLLTLIVPIVAVYPVCRYLLNYNVSASLLTASMLATHTLVAYPIVNRMGIAKNQAVP ITVAGTILTDTAVLLLLAVIIGYSQGNLTQEFWLHLAISLTIFTMIVFIVLPFIARWFFTKLENEKHAHYIFVLSAVFFS AFLSRVAGLEPIVGAFAAGLALNRLIPNSSALMNRIEFIGNSLFIPFFLISVGMLVDLRVILSGPMTLIIAALLTVVALA GKWLPAWVTQKLFKLSAAQRQLIFGLSSSRAAATIAIVLVGYQARILDLNILNATIILILVTCIVGSMVTEKAAKEIVVE ESQASPVDESDEASFSEQILLPIAEGLPSERVLEFAVLIREKRSAKPLILLSVVPNDHEAELNMKKSKKALEPMINYAAS FDTKLDIVATIDYNVSSGISRMARELQADLVVYGWPLHRGFIARLINDSAESIVNCTSKTTIICQITQPLALHRRLVVII PPLAEMEKGFEQWVAKMTLLSLELSIPMELHCNSKTHAAVLDSFDSMQSAPKLLFEPMKNARDWENLSRQRKRFKDDDII VLVSARKDSLSYKPYFDQSPEQLEKHFGGISKIMIYPASYGAANIAEGYVDVVVPEPIRIGASAIRKVGNELGLFLKKNQ QQIRKKIRDKRQNQQKTQDTTEKGDKP
Sequences:
>Translated_747_residues MEHYYVELLQEFQLPLTNPVLIFSLVLFIILLSPIVLKRFNIPGTVGLILSGVLIGPYALNLLEKSSAVDLFSTIGLLYI MFIAGAELQVNELKRNRNQSLLFGLLTLIVPIVAVYPVCRYLLNYNVSASLLTASMLATHTLVAYPIVNRMGIAKNQAVP ITVAGTILTDTAVLLLLAVIIGYSQGNLTQEFWLHLAISLTIFTMIVFIVLPFIARWFFTKLENEKHAHYIFVLSAVFFS AFLSRVAGLEPIVGAFAAGLALNRLIPNSSALMNRIEFIGNSLFIPFFLISVGMLVDLRVILSGPMTLIIAALLTVVALA GKWLPAWVTQKLFKLSAAQRQLIFGLSSSRAAATIAIVLVGYQARILDLNILNATIILILVTCIVGSMVTEKAAKEIVVE ESQASPVDESDEASFSEQILLPIAEGLPSERVLEFAVLIREKRSAKPLILLSVVPNDHEAELNMKKSKKALEPMINYAAS FDTKLDIVATIDYNVSSGISRMARELQADLVVYGWPLHRGFIARLINDSAESIVNCTSKTTIICQITQPLALHRRLVVII PPLAEMEKGFEQWVAKMTLLSLELSIPMELHCNSKTHAAVLDSFDSMQSAPKLLFEPMKNARDWENLSRQRKRFKDDDII VLVSARKDSLSYKPYFDQSPEQLEKHFGGISKIMIYPASYGAANIAEGYVDVVVPEPIRIGASAIRKVGNELGLFLKKNQ QQIRKKIRDKRQNQQKTQDTTEKGDKP >Mature_747_residues MEHYYVELLQEFQLPLTNPVLIFSLVLFIILLSPIVLKRFNIPGTVGLILSGVLIGPYALNLLEKSSAVDLFSTIGLLYI MFIAGAELQVNELKRNRNQSLLFGLLTLIVPIVAVYPVCRYLLNYNVSASLLTASMLATHTLVAYPIVNRMGIAKNQAVP ITVAGTILTDTAVLLLLAVIIGYSQGNLTQEFWLHLAISLTIFTMIVFIVLPFIARWFFTKLENEKHAHYIFVLSAVFFS AFLSRVAGLEPIVGAFAAGLALNRLIPNSSALMNRIEFIGNSLFIPFFLISVGMLVDLRVILSGPMTLIIAALLTVVALA GKWLPAWVTQKLFKLSAAQRQLIFGLSSSRAAATIAIVLVGYQARILDLNILNATIILILVTCIVGSMVTEKAAKEIVVE ESQASPVDESDEASFSEQILLPIAEGLPSERVLEFAVLIREKRSAKPLILLSVVPNDHEAELNMKKSKKALEPMINYAAS FDTKLDIVATIDYNVSSGISRMARELQADLVVYGWPLHRGFIARLINDSAESIVNCTSKTTIICQITQPLALHRRLVVII PPLAEMEKGFEQWVAKMTLLSLELSIPMELHCNSKTHAAVLDSFDSMQSAPKLLFEPMKNARDWENLSRQRKRFKDDDII VLVSARKDSLSYKPYFDQSPEQLEKHFGGISKIMIYPASYGAANIAEGYVDVVVPEPIRIGASAIRKVGNELGLFLKKNQ QQIRKKIRDKRQNQQKTQDTTEKGDKP
Specific function: This is probably a Na(+)/H(+) antiporter [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]
Homologues:
Organism=Escherichia coli, GI1786232, Length=391, Percent_Identity=25.5754475703325, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322367, Length=458, Percent_Identity=24.8908296943231, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 82861; Mature: 82861
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHYYVELLQEFQLPLTNPVLIFSLVLFIILLSPIVLKRFNIPGTVGLILSGVLIGPYAL CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH NLLEKSSAVDLFSTIGLLYIMFIAGAELQVNELKRNRNQSLLFGLLTLIVPIVAVYPVCR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH YLLNYNVSASLLTASMLATHTLVAYPIVNRMGIAKNQAVPITVAGTILTDTAVLLLLAVI HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH IGYSQGNLTQEFWLHLAISLTIFTMIVFIVLPFIARWFFTKLENEKHAHYIFVLSAVFFS HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AFLSRVAGLEPIVGAFAAGLALNRLIPNSSALMNRIEFIGNSLFIPFFLISVGMLVDLRV HHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ILSGPMTLIIAALLTVVALAGKWLPAWVTQKLFKLSAAQRQLIFGLSSSRAAATIAIVLV HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEE GYQARILDLNILNATIILILVTCIVGSMVTEKAAKEIVVEESQASPVDESDEASFSEQIL CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH LPIAEGLPSERVLEFAVLIREKRSAKPLILLSVVPNDHEAELNMKKSKKALEPMINYAAS HHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHC FDTKLDIVATIDYNVSSGISRMARELQADLVVYGWPLHRGFIARLINDSAESIVNCTSKT CCCCEEEEEEECCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC TIICQITQPLALHRRLVVIIPPLAEMEKGFEQWVAKMTLLSLELSIPMELHCNSKTHAAV EEEEEECCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHEEECCCEEEECCCCHHHHH LDSFDSMQSAPKLLFEPMKNARDWENLSRQRKRFKDDDIIVLVSARKDSLSYKPYFDQSP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCH EQLEKHFGGISKIMIYPASYGAANIAEGYVDVVVPEPIRIGASAIRKVGNELGLFLKKNQ HHHHHHHCCCEEEEEEECCCCCCHHHCCCEEEECCCCHHHCHHHHHHHHHHHHHHHHCCH QQIRKKIRDKRQNQQKTQDTTEKGDKP HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEHYYVELLQEFQLPLTNPVLIFSLVLFIILLSPIVLKRFNIPGTVGLILSGVLIGPYAL CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH NLLEKSSAVDLFSTIGLLYIMFIAGAELQVNELKRNRNQSLLFGLLTLIVPIVAVYPVCR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH YLLNYNVSASLLTASMLATHTLVAYPIVNRMGIAKNQAVPITVAGTILTDTAVLLLLAVI HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH IGYSQGNLTQEFWLHLAISLTIFTMIVFIVLPFIARWFFTKLENEKHAHYIFVLSAVFFS HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AFLSRVAGLEPIVGAFAAGLALNRLIPNSSALMNRIEFIGNSLFIPFFLISVGMLVDLRV HHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ILSGPMTLIIAALLTVVALAGKWLPAWVTQKLFKLSAAQRQLIFGLSSSRAAATIAIVLV HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEE GYQARILDLNILNATIILILVTCIVGSMVTEKAAKEIVVEESQASPVDESDEASFSEQIL CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH LPIAEGLPSERVLEFAVLIREKRSAKPLILLSVVPNDHEAELNMKKSKKALEPMINYAAS HHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHC FDTKLDIVATIDYNVSSGISRMARELQADLVVYGWPLHRGFIARLINDSAESIVNCTSKT CCCCEEEEEEECCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC TIICQITQPLALHRRLVVIIPPLAEMEKGFEQWVAKMTLLSLELSIPMELHCNSKTHAAV EEEEEECCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHEEECCCEEEECCCCHHHHH LDSFDSMQSAPKLLFEPMKNARDWENLSRQRKRFKDDDIIVLVSARKDSLSYKPYFDQSP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCH EQLEKHFGGISKIMIYPASYGAANIAEGYVDVVVPEPIRIGASAIRKVGNELGLFLKKNQ HHHHHHHCCCEEEEEEECCCCCCHHHCCCEEEECCCCHHHCHHHHHHHHHHHHHHHHCCH QQIRKKIRDKRQNQQKTQDTTEKGDKP HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]