| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
Click here to switch to the map view.
The map label for this gene is 193212720
Identifier: 193212720
GI number: 193212720
Start: 1175091
End: 1175495
Strand: Direct
Name: 193212720
Synonym: Cpar_1065
Alternate gene names: NA
Gene position: 1175091-1175495 (Clockwise)
Preceding gene: 193212719
Following gene: 193212721
Centisome position: 51.33
GC content: 58.27
Gene sequence:
>405_bases ATGCTTGCCGACTCGATGCATCTGAAAATCCTGCTGCCGTACAAGGTGTTCGCCGTAAAAGAGAATGTGGTGGACATCGT GGCCGAAACGGAGAAGGGCTCCTACGGCGTTCTGCCGAACCGGCTCGACTGCATCGCGCCGCTTGTGCCGGGCATTCTGA TGTATAAGACTGCCAACGAAGGAGAAACCTTCGTTGCGGTCGATCAGGGCATTCTCGTCAAAACCGGCCCCGAGGTCGTC GTATCGGTGCGTCACGCCATTGGCGGTGTCGATCTCGGCCAGCTCGAATCGGCGGTGAAGCAGCAGTTTCTCGATCTCGA TGAGCGGGAACGCAGCGTGCGCGGTACGATGGCCAAGCTGGAGAGCAGCTTCATCCGGCGCTACATGGAGCTGAAGCATG AATGA
Upstream 100 bases:
>100_bases GAGAAAGTCGAGATCGAAAAGAACGAGACCGCCAAGCAGCCAGAAGCGGGAACAATGACTCAAGGGTCAGCAACAGTCAA ACCGGAAGGAGGAAACTGAA
Downstream 100 bases:
>100_bases ACGCGAGCACGGCAAACTGTCGGCAGACGAAAAGCCGCTTGAAAAGCGCGTCGGCGACAGTGAACTGCGCAAAATCATGG CGCGGAAAAACGCGAACCGG
Product: F0F1 ATP synthase subunit epsilon
Products: ADP; phosphate; H+
Alternate protein names: ATP Synthase F1 Epsilon Subunit; AlteRNAte F1F0 ATPase F1 Subunit Epsilon; H+-Transporting Two-Sector ATPase Delta/Epsilon Subunit; ATP Synthase Delta/Epsilon Subunit; H+Transporting Two-Sector ATPase Delta/Epsilon Subunit; ATP Synthase Epsilon Subunit
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MLADSMHLKILLPYKVFAVKENVVDIVAETEKGSYGVLPNRLDCIAPLVPGILMYKTANEGETFVAVDQGILVKTGPEVV VSVRHAIGGVDLGQLESAVKQQFLDLDERERSVRGTMAKLESSFIRRYMELKHE
Sequences:
>Translated_134_residues MLADSMHLKILLPYKVFAVKENVVDIVAETEKGSYGVLPNRLDCIAPLVPGILMYKTANEGETFVAVDQGILVKTGPEVV VSVRHAIGGVDLGQLESAVKQQFLDLDERERSVRGTMAKLESSFIRRYMELKHE >Mature_134_residues MLADSMHLKILLPYKVFAVKENVVDIVAETEKGSYGVLPNRLDCIAPLVPGILMYKTANEGETFVAVDQGILVKTGPEVV VSVRHAIGGVDLGQLESAVKQQFLDLDERERSVRGTMAKLESSFIRRYMELKHE
Specific function: Unknown
COG id: COG0355
COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.3.14
Molecular weight: Translated: 14873; Mature: 14873
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLADSMHLKILLPYKVFAVKENVVDIVAETEKGSYGVLPNRLDCIAPLVPGILMYKTANE CCCCCCEEEEEECEEEEEHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEEECCC GETFVAVDQGILVKTGPEVVVSVRHAIGGVDLGQLESAVKQQFLDLDERERSVRGTMAKL CCEEEEECCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH ESSFIRRYMELKHE HHHHHHHHHHHCCC >Mature Secondary Structure MLADSMHLKILLPYKVFAVKENVVDIVAETEKGSYGVLPNRLDCIAPLVPGILMYKTANE CCCCCCEEEEEECEEEEEHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEEECCC GETFVAVDQGILVKTGPEVVVSVRHAIGGVDLGQLESAVKQQFLDLDERERSVRGTMAKL CCEEEEECCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH ESSFIRRYMELKHE HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O; H+
Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA