| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is bmpA [H]
Identifier: 193212624
GI number: 193212624
Start: 1071321
End: 1072364
Strand: Direct
Name: bmpA [H]
Synonym: Cpar_0969
Alternate gene names: 193212624
Gene position: 1071321-1072364 (Clockwise)
Preceding gene: 193212623
Following gene: 193212625
Centisome position: 46.8
GC content: 55.94
Gene sequence:
>1044_bases ATGGCGCATCGGCACTTTTCACCATCGCTCCTCAGGCTTTCGTCTTTCCTGCTCATTTTCGTTTCGCTTCTTGCCGGTTG TTCCGGTAAGGAAAAAGCGGCCAGCTCGAATCCGGACGCCTACAAGGTTGGGCTGGTGTTCGATGTCGGAGGTCGTGGCG ACAAGTCGTTCAACGATTCTGCCTATAACGGACTCGAACTGGCCAAACAAAAGCTTGGCATCGATTTCGACTATATCGAG CCTCAGGGAGAGGGTGCAGACCGTGAGGCTGCATTGCGCCAGATGGCTGCCGATCCGGACGTAAAGCTCGTTATCGGTGT CGGCCTGCTCTTTACCGAAGATATTACGGCTATCGCCAAGGATTTTCCTGACAAGAAGTTCGCCTGTATCGATTACAATC CGCAGCCCGGAACCGAGATTCCGTCGAATCTTTCGGGGATTGTGTTCGAGGAGAAAAAGGGGTCGTTCCTGGCCGGGGCG CTTGCCGCACTTGAGTCCCAAACCGGTACGATCGGTTTTATCGGCGGCATGGATTCGAACATCATTCGCAAGTTCGAGAG TGGTTATGCAGCTGGTGCCCGCTATATGAAGCCGGACATCAAGATCATTACAAACTTCATCGGCATGACCGGCAGTGCGT TCAACGATCCGGCCAAAGGCAAAGAGCTGGCACTCGGTCAGTACAGCCGTGGCGCGGACATCATCTATCAGGCGGCTGGT GCAAGCGGTCTCGGCGTGATCGAAGCGGCCCGGGAGACTGGCAAGCTGGTGATCTGCACCGACATGGCACTTGAGTGGCC AGCGCCGGATCAGATGCTGACCAGCATCAACAAGGCGATCGACAAGGCGGTGCTGACCACGATTGACGATGCGATGAACG GCCGCTTCCAGGGAGGACGTCAGCGGATGTTCGGCCTTGACGGGCGCTACACCGATTACGTGTGGAACAGCGATACCGAA AAGCTGATCGATCCGGCCGTACATGAGCGCATCGAGAAGATTCGCCAGGACATTCTGGACGGCAACATCTCCGTTACGGA GTAA
Upstream 100 bases:
>100_bases GCGGCGCGGAGATGATTTCCGGCGCGGCGGTTTCCAAAAACGGCGCGATTTTGTTACATTCCGTTCAATATTTTCGACGA ATCAACCTCTCTTTACGGAC
Downstream 100 bases:
>100_bases AACAATAGCGCCCGAAAGGGCTTTCAGCGCGGCAGGAGCTTATTGCGCGCATTTATTACCAACAGTTCTTGAGATCATCC GTGGGGAAAAAAATCGTCGT
Product: basic membrane lipoprotein
Products: NA
Alternate protein names: Immunodominant antigen P39 [H]
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MAHRHFSPSLLRLSSFLLIFVSLLAGCSGKEKAASSNPDAYKVGLVFDVGGRGDKSFNDSAYNGLELAKQKLGIDFDYIE PQGEGADREAALRQMAADPDVKLVIGVGLLFTEDITAIAKDFPDKKFACIDYNPQPGTEIPSNLSGIVFEEKKGSFLAGA LAALESQTGTIGFIGGMDSNIIRKFESGYAAGARYMKPDIKIITNFIGMTGSAFNDPAKGKELALGQYSRGADIIYQAAG ASGLGVIEAARETGKLVICTDMALEWPAPDQMLTSINKAIDKAVLTTIDDAMNGRFQGGRQRMFGLDGRYTDYVWNSDTE KLIDPAVHERIEKIRQDILDGNISVTE
Sequences:
>Translated_347_residues MAHRHFSPSLLRLSSFLLIFVSLLAGCSGKEKAASSNPDAYKVGLVFDVGGRGDKSFNDSAYNGLELAKQKLGIDFDYIE PQGEGADREAALRQMAADPDVKLVIGVGLLFTEDITAIAKDFPDKKFACIDYNPQPGTEIPSNLSGIVFEEKKGSFLAGA LAALESQTGTIGFIGGMDSNIIRKFESGYAAGARYMKPDIKIITNFIGMTGSAFNDPAKGKELALGQYSRGADIIYQAAG ASGLGVIEAARETGKLVICTDMALEWPAPDQMLTSINKAIDKAVLTTIDDAMNGRFQGGRQRMFGLDGRYTDYVWNSDTE KLIDPAVHERIEKIRQDILDGNISVTE >Mature_346_residues AHRHFSPSLLRLSSFLLIFVSLLAGCSGKEKAASSNPDAYKVGLVFDVGGRGDKSFNDSAYNGLELAKQKLGIDFDYIEP QGEGADREAALRQMAADPDVKLVIGVGLLFTEDITAIAKDFPDKKFACIDYNPQPGTEIPSNLSGIVFEEKKGSFLAGAL AALESQTGTIGFIGGMDSNIIRKFESGYAAGARYMKPDIKIITNFIGMTGSAFNDPAKGKELALGQYSRGADIIYQAAGA SGLGVIEAARETGKLVICTDMALEWPAPDQMLTSINKAIDKAVLTTIDDAMNGRFQGGRQRMFGLDGRYTDYVWNSDTEK LIDPAVHERIEKIRQDILDGNISVTE
Specific function: Not known; immunogenic protein [H]
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BMP lipoprotein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003760 [H]
Pfam domain/function: PF02608 Bmp [H]
EC number: NA
Molecular weight: Translated: 37430; Mature: 37299
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHRHFSPSLLRLSSFLLIFVSLLAGCSGKEKAASSNPDAYKVGLVFDVGGRGDKSFNDS CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC AYNGLELAKQKLGIDFDYIEPQGEGADREAALRQMAADPDVKLVIGVGLLFTEDITAIAK HHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHH DFPDKKFACIDYNPQPGTEIPSNLSGIVFEEKKGSFLAGALAALESQTGTIGFIGGMDSN CCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCHH IIRKFESGYAAGARYMKPDIKIITNFIGMTGSAFNDPAKGKELALGQYSRGADIIYQAAG HHHHHHCCHHHCCHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECC ASGLGVIEAARETGKLVICTDMALEWPAPDQMLTSINKAIDKAVLTTIDDAMNGRFQGGR CCCCHHHHHHHHCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QRMFGLDGRYTDYVWNSDTEKLIDPAVHERIEKIRQDILDGNISVTE HHEECCCCCEEEEEECCCHHHHHCHHHHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure AHRHFSPSLLRLSSFLLIFVSLLAGCSGKEKAASSNPDAYKVGLVFDVGGRGDKSFNDS CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC AYNGLELAKQKLGIDFDYIEPQGEGADREAALRQMAADPDVKLVIGVGLLFTEDITAIAK HHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHH DFPDKKFACIDYNPQPGTEIPSNLSGIVFEEKKGSFLAGALAALESQTGTIGFIGGMDSN CCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCHH IIRKFESGYAAGARYMKPDIKIITNFIGMTGSAFNDPAKGKELALGQYSRGADIIYQAAG HHHHHHCCHHHCCHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECC ASGLGVIEAARETGKLVICTDMALEWPAPDQMLTSINKAIDKAVLTTIDDAMNGRFQGGR CCCCHHHHHHHHCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QRMFGLDGRYTDYVWNSDTEKLIDPAVHERIEKIRQDILDGNISVTE HHEECCCCCEEEEEECCCHHHHHCHHHHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8050720; 8978084; 9403685; 7812434 [H]