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The map label for this gene is yibD [C]

Identifier: 193212589

GI number: 193212589

Start: 1021429

End: 1022295

Strand: Direct

Name: yibD [C]

Synonym: Cpar_0930

Alternate gene names: 193212589

Gene position: 1021429-1022295 (Clockwise)

Preceding gene: 193212588

Following gene: 193212590

Centisome position: 44.62

GC content: 54.44

Gene sequence:

>867_bases
ATGGTACGAAGCGCTTCGCCGCTGGTTACGGTCACCATACCGATGTACAACAATGAGCGCTATATCGCAGAAACGATCGA
GTCTGTTCTTGCGCAGACGATGCCCGATTTCGAACTGCTGATCTATGACGATCATTCGACCGACCGTTCGCTTGAGATAG
CTCAGTCTTACGACGACCGTCGGATCAGCGTTTTTACCAGCGAGAAAAACCTTGGCCCGGAGGCTAACTGGAACCGCTCA
ATCAGCGATGTGCGGGGGCGGTACGTCAAGCTGCTCTGCGCGGACGATCTGCTGTTCCCGGAGTGCCTTGAAAAGCAGTG
TGCAGCCTACGAGCTTTCGGGTCAGGAGAAGGTGAGCCTGGTCTCGTCGTCGCGAACCATCATCGACCATGAGGGCAACC
CGCTCATCAACAAAGTCAGTTTCCTCGATGATGGCCTGAAAAGCCCTTCGGATGTTGTCAGAAAAATGGTGCGTACAGGC
ACTAATATCATCGGCGAGCCGGTCTGCGGGCTCTATCCATCCAGCCTGATCGCTTCGACCAACGGCTATAGCGCACGCAT
TCCGTATACTACCGATCTCGATTTCTGGGTACAGTTGTTGCGGCTCGGCAATCTCTGGATGATCGACGAAGCGCTCTGCG
CGTTTCGGATTTCCGGCCGCTCGTGGTCGTCCAGAATAGGATCGATGCGCCATGAGCAGTTTGTTGAATTCATGAACGAG
GTTGCCCTCGACGAGCAGTTTCAGGTCAACGAGCTCGATCTGTTTATCGGCCGCTTCAACTCTGCGGTGCAGTCCATGAC
CAGCCTTATGGGCTTTAAACTGTTCGCCGGATCGGCAAGTCAGAAACGGGTGATTCCGGTAACGTAA

Upstream 100 bases:

>100_bases
AAAGAAAGCCACCAGGGCCTGGGCTGATGAACATGCCGCCCGATTCACCGAAGAGTAGTTGCCAACGAGGTAGCGATGTT
TTGCAGAAGGAGGATTTTTT

Downstream 100 bases:

>100_bases
CCAGACTTGCCCGCAAAAACCCGCTAACCATTATTTCATTCAAGCTATGAGACTGGAAGGCAAGGTCGCCATCGTGACCG
GGGCGGCAGGGGGAATCGGC

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MVRSASPLVTVTIPMYNNERYIAETIESVLAQTMPDFELLIYDDHSTDRSLEIAQSYDDRRISVFTSEKNLGPEANWNRS
ISDVRGRYVKLLCADDLLFPECLEKQCAAYELSGQEKVSLVSSSRTIIDHEGNPLINKVSFLDDGLKSPSDVVRKMVRTG
TNIIGEPVCGLYPSSLIASTNGYSARIPYTTDLDFWVQLLRLGNLWMIDEALCAFRISGRSWSSRIGSMRHEQFVEFMNE
VALDEQFQVNELDLFIGRFNSAVQSMTSLMGFKLFAGSASQKRVIPVT

Sequences:

>Translated_288_residues
MVRSASPLVTVTIPMYNNERYIAETIESVLAQTMPDFELLIYDDHSTDRSLEIAQSYDDRRISVFTSEKNLGPEANWNRS
ISDVRGRYVKLLCADDLLFPECLEKQCAAYELSGQEKVSLVSSSRTIIDHEGNPLINKVSFLDDGLKSPSDVVRKMVRTG
TNIIGEPVCGLYPSSLIASTNGYSARIPYTTDLDFWVQLLRLGNLWMIDEALCAFRISGRSWSSRIGSMRHEQFVEFMNE
VALDEQFQVNELDLFIGRFNSAVQSMTSLMGFKLFAGSASQKRVIPVT
>Mature_288_residues
MVRSASPLVTVTIPMYNNERYIAETIESVLAQTMPDFELLIYDDHSTDRSLEIAQSYDDRRISVFTSEKNLGPEANWNRS
ISDVRGRYVKLLCADDLLFPECLEKQCAAYELSGQEKVSLVSSSRTIIDHEGNPLINKVSFLDDGLKSPSDVVRKMVRTG
TNIIGEPVCGLYPSSLIASTNGYSARIPYTTDLDFWVQLLRLGNLWMIDEALCAFRISGRSWSSRIGSMRHEQFVEFMNE
VALDEQFQVNELDLFIGRFNSAVQSMTSLMGFKLFAGSASQKRVIPVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 32440; Mature: 32440

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRSASPLVTVTIPMYNNERYIAETIESVLAQTMPDFELLIYDDHSTDRSLEIAQSYDDR
CCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCC
RISVFTSEKNLGPEANWNRSISDVRGRYVKLLCADDLLFPECLEKQCAAYELSGQEKVSL
EEEEEECCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHEECCCCHHEEE
VSSSRTIIDHEGNPLINKVSFLDDGLKSPSDVVRKMVRTGTNIIGEPVCGLYPSSLIAST
ECCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC
NGYSARIPYTTDLDFWVQLLRLGNLWMIDEALCAFRISGRSWSSRIGSMRHEQFVEFMNE
CCCEEECCCCCCHHHHHHHHHHCCEEEHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHH
VALDEQFQVNELDLFIGRFNSAVQSMTSLMGFKLFAGSASQKRVIPVT
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC
>Mature Secondary Structure
MVRSASPLVTVTIPMYNNERYIAETIESVLAQTMPDFELLIYDDHSTDRSLEIAQSYDDR
CCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCC
RISVFTSEKNLGPEANWNRSISDVRGRYVKLLCADDLLFPECLEKQCAAYELSGQEKVSL
EEEEEECCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHEECCCCHHEEE
VSSSRTIIDHEGNPLINKVSFLDDGLKSPSDVVRKMVRTGTNIIGEPVCGLYPSSLIAST
ECCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC
NGYSARIPYTTDLDFWVQLLRLGNLWMIDEALCAFRISGRSWSSRIGSMRHEQFVEFMNE
CCCEEECCCCCCHHHHHHHHHHCCEEEHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHH
VALDEQFQVNELDLFIGRFNSAVQSMTSLMGFKLFAGSASQKRVIPVT
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]