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The map label for this gene is 193212588

Identifier: 193212588

GI number: 193212588

Start: 1020094

End: 1021386

Strand: Direct

Name: 193212588

Synonym: Cpar_0929

Alternate gene names: NA

Gene position: 1020094-1021386 (Clockwise)

Preceding gene: 193212587

Following gene: 193212589

Centisome position: 44.56

GC content: 60.71

Gene sequence:

>1293_bases
ATGACACCGTCACGTTACCGTTCCCTTGTCCTTGCCGCTTCTGCGACACTCGTGCTGACCAGCAGCCCGCAGCCGGTTTG
CGCTGCCGATGCCCGGCAGGAAGCTGTGCTGCGCGAGGGCAGCTCCGAGTGGAACGAGATGCGAAAGGCTCAGCCGTCTG
TGCCGGTTGATCTTTCCGAGGCGAAGCTGAAAGGTCGTCGTTTGCGCGAGGTCGATCTCAGCAAGGCCAAGCTTGTCGGA
GCTGATCTGAGCCAGTCCGATTTAGGTGGTTCCGATTTCAGCGACGCTGATCTGCACGGCGCGATGCTGGACGAGGCGTA
TCTGGGGGGAAGCAGAATGGCGGGAGCCGATCTTTCAGGTGCATCCTTTGAACGCGCTTCGGCAGCGGAGGCCGATTTCA
GCCGGGCAAAGATGCCTTCGAGCGTGCTTCGGCGCTCCGAGTTGACCGGCGCTCGATTCGCGGGGGCCGATCTTCGCGGA
GCCGATCTTCGTGAGTCGAGAATGGAACATGCCGACCTCAGCCATGCCGACCTCCGGGCAGCCAATTTCTGGCTGGCGAG
CACCAGCGGGGTCAATTTCAACGGGGCGCTGATTTCCGACGAAACCGTGCTGCCGAACGGTAAGCCCGGTTCAGTGAAGT
GGGCTGCCGAGCACGGCGTCGTGTTCATGCCGGTTTCAAAACCGGTTGCAGCGCCGAACAAAGCCGCCACTTCTTCCGTT
GCAGCCTCATCGAAAGAAATGGCAGGCTCGTCGGCAACAGCTCCAGCATCAGCACCTCTCGCCGGGAAGCCAGCGCCGCA
AGGCATGTCGCCAGAGCAGCCGCTTGCCGCCACGCTCAAGCCGCTTCGCGCATGGCGACCCGATCCTGAATCGATTGCTT
ATGACGCCGATCAGTACGAGCAGCTCAAATCGAATGTCACGAAATGGAACCGGATGAGGGAAGAGCAACCGAGCCTCAAG
GTTATGCTCCGGGAAGCGCCGCTTGCCAACCGGGTACTGGCCTATGCCGATCTGCATGAGGCTGATCTGGAAAAGGCGTC
CTTCAAGCGCACCGATCTGGATGAAGCCGATTTTCGCGGCGCCAATCTCCGGGGCGCTGACCTGCGTTCGGCCAATCTCC
AGCAGGTCGATTTCCGCCAGGCCGATCTCCGGGGGGCGAATTTGTGGCTTGCCAATACCAGCCGCTCAAAATTTGACGGG
GCGATTGTTTCGCCGGAAACGGTGCTCGATAATGGAAAGAAAGCCACCAGGGCCTGGGCTGATGAACATGCCGCCCGATT
CACCGAAGAGTAG

Upstream 100 bases:

>100_bases
GGGCTTCGGCGGGGTGGTGTATGCTTTCGCGGCTCTGTACCTGTTACGCAACCTTTTCCACGATCCGGTCTTCGAGACTG
GTGATAACCAATAACCTCCG

Downstream 100 bases:

>100_bases
TTGCCAACGAGGTAGCGATGTTTTGCAGAAGGAGGATTTTTTATGGTACGAAGCGCTTCGCCGCTGGTTACGGTCACCAT
ACCGATGTACAACAATGAGC

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MTPSRYRSLVLAASATLVLTSSPQPVCAADARQEAVLREGSSEWNEMRKAQPSVPVDLSEAKLKGRRLREVDLSKAKLVG
ADLSQSDLGGSDFSDADLHGAMLDEAYLGGSRMAGADLSGASFERASAAEADFSRAKMPSSVLRRSELTGARFAGADLRG
ADLRESRMEHADLSHADLRAANFWLASTSGVNFNGALISDETVLPNGKPGSVKWAAEHGVVFMPVSKPVAAPNKAATSSV
AASSKEMAGSSATAPASAPLAGKPAPQGMSPEQPLAATLKPLRAWRPDPESIAYDADQYEQLKSNVTKWNRMREEQPSLK
VMLREAPLANRVLAYADLHEADLEKASFKRTDLDEADFRGANLRGADLRSANLQQVDFRQADLRGANLWLANTSRSKFDG
AIVSPETVLDNGKKATRAWADEHAARFTEE

Sequences:

>Translated_430_residues
MTPSRYRSLVLAASATLVLTSSPQPVCAADARQEAVLREGSSEWNEMRKAQPSVPVDLSEAKLKGRRLREVDLSKAKLVG
ADLSQSDLGGSDFSDADLHGAMLDEAYLGGSRMAGADLSGASFERASAAEADFSRAKMPSSVLRRSELTGARFAGADLRG
ADLRESRMEHADLSHADLRAANFWLASTSGVNFNGALISDETVLPNGKPGSVKWAAEHGVVFMPVSKPVAAPNKAATSSV
AASSKEMAGSSATAPASAPLAGKPAPQGMSPEQPLAATLKPLRAWRPDPESIAYDADQYEQLKSNVTKWNRMREEQPSLK
VMLREAPLANRVLAYADLHEADLEKASFKRTDLDEADFRGANLRGADLRSANLQQVDFRQADLRGANLWLANTSRSKFDG
AIVSPETVLDNGKKATRAWADEHAARFTEE
>Mature_429_residues
TPSRYRSLVLAASATLVLTSSPQPVCAADARQEAVLREGSSEWNEMRKAQPSVPVDLSEAKLKGRRLREVDLSKAKLVGA
DLSQSDLGGSDFSDADLHGAMLDEAYLGGSRMAGADLSGASFERASAAEADFSRAKMPSSVLRRSELTGARFAGADLRGA
DLRESRMEHADLSHADLRAANFWLASTSGVNFNGALISDETVLPNGKPGSVKWAAEHGVVFMPVSKPVAAPNKAATSSVA
ASSKEMAGSSATAPASAPLAGKPAPQGMSPEQPLAATLKPLRAWRPDPESIAYDADQYEQLKSNVTKWNRMREEQPSLKV
MLREAPLANRVLAYADLHEADLEKASFKRTDLDEADFRGANLRGADLRSANLQQVDFRQADLRGANLWLANTSRSKFDGA
IVSPETVLDNGKKATRAWADEHAARFTEE

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 46119; Mature: 45988

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSRYRSLVLAASATLVLTSSPQPVCAADARQEAVLREGSSEWNEMRKAQPSVPVDLSE
CCCHHHHHHHEEECEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHH
AKLKGRRLREVDLSKAKLVGADLSQSDLGGSDFSDADLHGAMLDEAYLGGSRMAGADLSG
HHHCCCHHHHHCCCHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
ASFERASAAEADFSRAKMPSSVLRRSELTGARFAGADLRGADLRESRMEHADLSHADLRA
CCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHCCCCHHHHHH
ANFWLASTSGVNFNGALISDETVLPNGKPGSVKWAAEHGVVFMPVSKPVAAPNKAATSSV
HEEEEEECCCCCCCCEEEECCEECCCCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHH
AASSKEMAGSSATAPASAPLAGKPAPQGMSPEQPLAATLKPLRAWRPDPESIAYDADQYE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCHHHHH
QLKSNVTKWNRMREEQPSLKVMLREAPLANRVLAYADLHEADLEKASFKRTDLDEADFRG
HHHHHHHHHHHHHHCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ANLRGADLRSANLQQVDFRQADLRGANLWLANTSRSKFDGAIVSPETVLDNGKKATRAWA
CCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCEECCHHHHCCCCHHHHHHH
DEHAARFTEE
HHHHHHCCCC
>Mature Secondary Structure 
TPSRYRSLVLAASATLVLTSSPQPVCAADARQEAVLREGSSEWNEMRKAQPSVPVDLSE
CCHHHHHHHEEECEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHH
AKLKGRRLREVDLSKAKLVGADLSQSDLGGSDFSDADLHGAMLDEAYLGGSRMAGADLSG
HHHCCCHHHHHCCCHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
ASFERASAAEADFSRAKMPSSVLRRSELTGARFAGADLRGADLRESRMEHADLSHADLRA
CCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHCCCCHHHHHH
ANFWLASTSGVNFNGALISDETVLPNGKPGSVKWAAEHGVVFMPVSKPVAAPNKAATSSV
HEEEEEECCCCCCCCEEEECCEECCCCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHH
AASSKEMAGSSATAPASAPLAGKPAPQGMSPEQPLAATLKPLRAWRPDPESIAYDADQYE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCHHHHH
QLKSNVTKWNRMREEQPSLKVMLREAPLANRVLAYADLHEADLEKASFKRTDLDEADFRG
HHHHHHHHHHHHHHCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ANLRGADLRSANLQQVDFRQADLRGANLWLANTSRSKFDGAIVSPETVLDNGKKATRAWA
CCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCEECCHHHHCCCCHHHHHHH
DEHAARFTEE
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA