| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212386
Identifier: 193212386
GI number: 193212386
Start: 770522
End: 771127
Strand: Direct
Name: 193212386
Synonym: Cpar_0720
Alternate gene names: NA
Gene position: 770522-771127 (Clockwise)
Preceding gene: 193212385
Following gene: 193212390
Centisome position: 33.66
GC content: 40.26
Gene sequence:
>606_bases ATGCAACTCATATTTTCACTCTATCCGCGTCTATGCAAAGCAGAAGAGTTTCCTCAAGCACAGCCTTCAGAAGCTGCCAG GGAATACGAAAAACTGCTTGAAATTGATCTCTCAAAGATGCCGGATGGCGTTACCGGCATGAAAAGTACTGTTTACATCA ACGCACTTCCTGTTACGGTATGGAAGGTTCTTACCGATTACAATAACCTCAAGCGTTATATCCCGAGAATGACGGAAAGT GATCTTGTTGAGGAAAATGGCGACTTGAAAGTGATTGCTTTAATCGGTGAGTTTCGAGTACTTTTTTTTAAAAAAACCAT TCGATTATCAATCAACATGCATGAAACCTATCCTTCAAGAATCGATTATGAAAAAATTTCAGGTGATTTCGAAATCTACA GAGGCTCCTGGATACTTCAGGCCTATTCATCCAAAGGAACCATATTAACCTATAAATCAGAAATTAAACCTTCTTTTGTC GCACCAGACTTTATTTTTCAGGGCGTTCTTAAAAAAGACATGGTTGCAGGACTTACTGCACTAAAAGCAGAGGCGGAACG GTTGCAAGTGATTGATTCTGGCAAGCCGGCAGACCAAAAGAAATGA
Upstream 100 bases:
>100_bases GACGGTGAACTCAGGATTTTCATTATCACGATCCATTGGATCATCAGGTCTCTTGTTAACTGGTCGTTTGCGTCTGGCAA CGATCACGATTGTTGCTGTC
Downstream 100 bases:
>100_bases ATTCTGGCCTGATTTTCGGAAATGGCGCTTCCGGGGAAGACGTCTCTTCCCGGGTCTGTCAGGAGGTTTGGCGTTGGCTT CTACAGCTTGTGCCTCACGT
Product: cyclase/dehydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MQLIFSLYPRLCKAEEFPQAQPSEAAREYEKLLEIDLSKMPDGVTGMKSTVYINALPVTVWKVLTDYNNLKRYIPRMTES DLVEENGDLKVIALIGEFRVLFFKKTIRLSINMHETYPSRIDYEKISGDFEIYRGSWILQAYSSKGTILTYKSEIKPSFV APDFIFQGVLKKDMVAGLTALKAEAERLQVIDSGKPADQKK
Sequences:
>Translated_201_residues MQLIFSLYPRLCKAEEFPQAQPSEAAREYEKLLEIDLSKMPDGVTGMKSTVYINALPVTVWKVLTDYNNLKRYIPRMTES DLVEENGDLKVIALIGEFRVLFFKKTIRLSINMHETYPSRIDYEKISGDFEIYRGSWILQAYSSKGTILTYKSEIKPSFV APDFIFQGVLKKDMVAGLTALKAEAERLQVIDSGKPADQKK >Mature_201_residues MQLIFSLYPRLCKAEEFPQAQPSEAAREYEKLLEIDLSKMPDGVTGMKSTVYINALPVTVWKVLTDYNNLKRYIPRMTES DLVEENGDLKVIALIGEFRVLFFKKTIRLSINMHETYPSRIDYEKISGDFEIYRGSWILQAYSSKGTILTYKSEIKPSFV APDFIFQGVLKKDMVAGLTALKAEAERLQVIDSGKPADQKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22974; Mature: 22974
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLIFSLYPRLCKAEEFPQAQPSEAAREYEKLLEIDLSKMPDGVTGMKSTVYINALPVTV CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHH WKVLTDYNNLKRYIPRMTESDLVEENGDLKVIALIGEFRVLFFKKTIRLSINMHETYPSR HHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEHHHHHHEEEEEEEEEEEECCCCCCC IDYEKISGDFEIYRGSWILQAYSSKGTILTYKSEIKPSFVAPDFIFQGVLKKDMVAGLTA CCHHHCCCCEEEEECEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH LKAEAERLQVIDSGKPADQKK HHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MQLIFSLYPRLCKAEEFPQAQPSEAAREYEKLLEIDLSKMPDGVTGMKSTVYINALPVTV CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHH WKVLTDYNNLKRYIPRMTESDLVEENGDLKVIALIGEFRVLFFKKTIRLSINMHETYPSR HHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEHHHHHHEEEEEEEEEEEECCCCCCC IDYEKISGDFEIYRGSWILQAYSSKGTILTYKSEIKPSFVAPDFIFQGVLKKDMVAGLTA CCHHHCCCCEEEEECEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH LKAEAERLQVIDSGKPADQKK HHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA