Definition Chlorobaculum parvum NCIB 8327 chromosome, complete genome.
Accession NC_011027
Length 2,289,249

Click here to switch to the map view.

The map label for this gene is 193212386

Identifier: 193212386

GI number: 193212386

Start: 770522

End: 771127

Strand: Direct

Name: 193212386

Synonym: Cpar_0720

Alternate gene names: NA

Gene position: 770522-771127 (Clockwise)

Preceding gene: 193212385

Following gene: 193212390

Centisome position: 33.66

GC content: 40.26

Gene sequence:

>606_bases
ATGCAACTCATATTTTCACTCTATCCGCGTCTATGCAAAGCAGAAGAGTTTCCTCAAGCACAGCCTTCAGAAGCTGCCAG
GGAATACGAAAAACTGCTTGAAATTGATCTCTCAAAGATGCCGGATGGCGTTACCGGCATGAAAAGTACTGTTTACATCA
ACGCACTTCCTGTTACGGTATGGAAGGTTCTTACCGATTACAATAACCTCAAGCGTTATATCCCGAGAATGACGGAAAGT
GATCTTGTTGAGGAAAATGGCGACTTGAAAGTGATTGCTTTAATCGGTGAGTTTCGAGTACTTTTTTTTAAAAAAACCAT
TCGATTATCAATCAACATGCATGAAACCTATCCTTCAAGAATCGATTATGAAAAAATTTCAGGTGATTTCGAAATCTACA
GAGGCTCCTGGATACTTCAGGCCTATTCATCCAAAGGAACCATATTAACCTATAAATCAGAAATTAAACCTTCTTTTGTC
GCACCAGACTTTATTTTTCAGGGCGTTCTTAAAAAAGACATGGTTGCAGGACTTACTGCACTAAAAGCAGAGGCGGAACG
GTTGCAAGTGATTGATTCTGGCAAGCCGGCAGACCAAAAGAAATGA

Upstream 100 bases:

>100_bases
GACGGTGAACTCAGGATTTTCATTATCACGATCCATTGGATCATCAGGTCTCTTGTTAACTGGTCGTTTGCGTCTGGCAA
CGATCACGATTGTTGCTGTC

Downstream 100 bases:

>100_bases
ATTCTGGCCTGATTTTCGGAAATGGCGCTTCCGGGGAAGACGTCTCTTCCCGGGTCTGTCAGGAGGTTTGGCGTTGGCTT
CTACAGCTTGTGCCTCACGT

Product: cyclase/dehydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MQLIFSLYPRLCKAEEFPQAQPSEAAREYEKLLEIDLSKMPDGVTGMKSTVYINALPVTVWKVLTDYNNLKRYIPRMTES
DLVEENGDLKVIALIGEFRVLFFKKTIRLSINMHETYPSRIDYEKISGDFEIYRGSWILQAYSSKGTILTYKSEIKPSFV
APDFIFQGVLKKDMVAGLTALKAEAERLQVIDSGKPADQKK

Sequences:

>Translated_201_residues
MQLIFSLYPRLCKAEEFPQAQPSEAAREYEKLLEIDLSKMPDGVTGMKSTVYINALPVTVWKVLTDYNNLKRYIPRMTES
DLVEENGDLKVIALIGEFRVLFFKKTIRLSINMHETYPSRIDYEKISGDFEIYRGSWILQAYSSKGTILTYKSEIKPSFV
APDFIFQGVLKKDMVAGLTALKAEAERLQVIDSGKPADQKK
>Mature_201_residues
MQLIFSLYPRLCKAEEFPQAQPSEAAREYEKLLEIDLSKMPDGVTGMKSTVYINALPVTVWKVLTDYNNLKRYIPRMTES
DLVEENGDLKVIALIGEFRVLFFKKTIRLSINMHETYPSRIDYEKISGDFEIYRGSWILQAYSSKGTILTYKSEIKPSFV
APDFIFQGVLKKDMVAGLTALKAEAERLQVIDSGKPADQKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22974; Mature: 22974

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLIFSLYPRLCKAEEFPQAQPSEAAREYEKLLEIDLSKMPDGVTGMKSTVYINALPVTV
CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHH
WKVLTDYNNLKRYIPRMTESDLVEENGDLKVIALIGEFRVLFFKKTIRLSINMHETYPSR
HHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEHHHHHHEEEEEEEEEEEECCCCCCC
IDYEKISGDFEIYRGSWILQAYSSKGTILTYKSEIKPSFVAPDFIFQGVLKKDMVAGLTA
CCHHHCCCCEEEEECEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LKAEAERLQVIDSGKPADQKK
HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQLIFSLYPRLCKAEEFPQAQPSEAAREYEKLLEIDLSKMPDGVTGMKSTVYINALPVTV
CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHH
WKVLTDYNNLKRYIPRMTESDLVEENGDLKVIALIGEFRVLFFKKTIRLSINMHETYPSR
HHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEHHHHHHEEEEEEEEEEEECCCCCCC
IDYEKISGDFEIYRGSWILQAYSSKGTILTYKSEIKPSFVAPDFIFQGVLKKDMVAGLTA
CCHHHCCCCEEEEECEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LKAEAERLQVIDSGKPADQKK
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA