| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212223
Identifier: 193212223
GI number: 193212223
Start: 595209
End: 595535
Strand: Direct
Name: 193212223
Synonym: Cpar_0554
Alternate gene names: NA
Gene position: 595209-595535 (Clockwise)
Preceding gene: 193212222
Following gene: 193212224
Centisome position: 26.0
GC content: 46.18
Gene sequence:
>327_bases ATGACTAAATCCGTTACCAGTGATGCGGTTACCGTCAAGGTCACCCTTCGGCACTCGAACAATCATGGCACTATAGAAGA ATATGCCCGTGATGCGGTTTCAGCACTTTCTAAATATTATCCCGGACCACTCAATTGTCATGTGATTCTCGATCATCAGA AGCACGAGCATGATCAGAATAAAATGGCCGAAATCACTGTGCATGTGCCGCAGCACGATTTTGTCGCTCGCGAGTCTGCC CCGACTTACGAACAGGCGATTGACAGCTGTATCGATATCCTTTCACGACAGCTTAAAAAACTGAAAGACAAGCAAAGCAC TTTCTGA
Upstream 100 bases:
>100_bases CAGGGGCTTGATCTCTGTCGTTCGCCGAAAGTTGTTGACAAGGCAGAATTGATGCCGGTTTCGTTCTTTGCAAGTTTATA ATTCTTTAATGGAGGTAAGT
Downstream 100 bases:
>100_bases AATCGGCAATCGCAACAGGGTCAGCACGCTGACCCTGTTGCAGTATCGGGCTTTGCAAACACCATGATTTCCCGGGCATG AATTTCGACCAGAAGGGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MTKSVTSDAVTVKVTLRHSNNHGTIEEYARDAVSALSKYYPGPLNCHVILDHQKHEHDQNKMAEITVHVPQHDFVARESA PTYEQAIDSCIDILSRQLKKLKDKQSTF
Sequences:
>Translated_108_residues MTKSVTSDAVTVKVTLRHSNNHGTIEEYARDAVSALSKYYPGPLNCHVILDHQKHEHDQNKMAEITVHVPQHDFVARESA PTYEQAIDSCIDILSRQLKKLKDKQSTF >Mature_107_residues TKSVTSDAVTVKVTLRHSNNHGTIEEYARDAVSALSKYYPGPLNCHVILDHQKHEHDQNKMAEITVHVPQHDFVARESAP TYEQAIDSCIDILSRQLKKLKDKQSTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12257; Mature: 12126
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSVTSDAVTVKVTLRHSNNHGTIEEYARDAVSALSKYYPGPLNCHVILDHQKHEHDQN CCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC KMAEITVHVPQHDFVARESAPTYEQAIDSCIDILSRQLKKLKDKQSTF CEEEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TKSVTSDAVTVKVTLRHSNNHGTIEEYARDAVSALSKYYPGPLNCHVILDHQKHEHDQN CCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC KMAEITVHVPQHDFVARESAPTYEQAIDSCIDILSRQLKKLKDKQSTF CEEEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA