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The map label for this gene is 193212169

Identifier: 193212169

GI number: 193212169

Start: 536052

End: 536876

Strand: Direct

Name: 193212169

Synonym: Cpar_0500

Alternate gene names: NA

Gene position: 536052-536876 (Clockwise)

Preceding gene: 193212168

Following gene: 193212172

Centisome position: 23.42

GC content: 48.61

Gene sequence:

>825_bases
ATGTACAAGTTCATCACAGATAACGTAGTTGTTTTCGATGTCGAGTGGGTTCCGGATCCGGCGTCAGGCAGGCGTATTTA
CAAGATCCCGGATACAGCCTCTGATGATGAAGTCCTTGACGTCATGTGGCGAGAGGGTGGTGCAACACCGGATGACCCTC
GCCCATATCTGAAAACGGTGATGTGCAGGGTCGTCTCCATTGCTGCGCTTGTTCGAAAAATGGTGCGAGACGAAGTAACT
CTTAAGCTCATATCTCTACCCGGCCTGGATGTTAGCGAGCAAGCGGAAGGGGAAATTATCCGACAGTTTTTGGAAGCCGT
CGGGAAACAAAGAGCACAGATCGTAGGGTTCAATTCGTCAAATGCCGATCTGCCTATTCTGTACCAAAGAGCCCTTGCGA
ACAGGGTAAGTGCACCGACTTTTTGTCATCGCCCTGACAAGCCTTGGGAAGGTGTGGATTACTTTAACAGATATAGCGAT
TTTAGCATCGATTTGAAGGATCTGGTTGGTGGCTACGGAAAAGCGATGCCATCGCTCCACGAATTAGCATCTTCACTTGG
AATTCCAGGCAAAATGGGAACCGATGGTGCTGACGTAATCGATTTATGGCGATCAGGCGATATTAGGAAAATTGTCGAGT
ACAATCAGTTCGATGCGATCTCGACCTACCTTGTATGGCTGAGAACCGCCTATTTTTCCGGAATGCTGACGGAAGATGAA
TTCGTGCAGGAAGAGCATACGTTAGAAACTCTTCTGCTTCAGGAGATTGAGAGCGGTTCGGAGCATCTGGCCCTTTTTCT
CGATGCGTGGAAAACATTACGCTAG

Upstream 100 bases:

>100_bases
GATGGACAACAATCTGACAAAACTATGCCTTGATCGATACAGTCGGTGTCGTGTCTTATGCTTTGGTTGATTGGCCGATG
TTCTAAACTGAGGAGTCACA

Downstream 100 bases:

>100_bases
TCGACTGAATAAATGATTGTCGTAAGGCGGAAGAGAGTAGGGGGTGTTGTTCAGTAAGCGCGATAACTCAATTTTGAAAT
ACTGTCAGCAATCCTTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: 3-5' Exonuclease PolB-Like Protein; Polysaccharide Biosynthesis Protein; Propable PolB; Lipoprotein SmpA/OmlA Family; 3&Apos; Polysaccharide Biosynthesis Protein WlaX; Large-Conductance Mechanosensitive Channel

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MYKFITDNVVVFDVEWVPDPASGRRIYKIPDTASDDEVLDVMWREGGATPDDPRPYLKTVMCRVVSIAALVRKMVRDEVT
LKLISLPGLDVSEQAEGEIIRQFLEAVGKQRAQIVGFNSSNADLPILYQRALANRVSAPTFCHRPDKPWEGVDYFNRYSD
FSIDLKDLVGGYGKAMPSLHELASSLGIPGKMGTDGADVIDLWRSGDIRKIVEYNQFDAISTYLVWLRTAYFSGMLTEDE
FVQEEHTLETLLLQEIESGSEHLALFLDAWKTLR

Sequences:

>Translated_274_residues
MYKFITDNVVVFDVEWVPDPASGRRIYKIPDTASDDEVLDVMWREGGATPDDPRPYLKTVMCRVVSIAALVRKMVRDEVT
LKLISLPGLDVSEQAEGEIIRQFLEAVGKQRAQIVGFNSSNADLPILYQRALANRVSAPTFCHRPDKPWEGVDYFNRYSD
FSIDLKDLVGGYGKAMPSLHELASSLGIPGKMGTDGADVIDLWRSGDIRKIVEYNQFDAISTYLVWLRTAYFSGMLTEDE
FVQEEHTLETLLLQEIESGSEHLALFLDAWKTLR
>Mature_274_residues
MYKFITDNVVVFDVEWVPDPASGRRIYKIPDTASDDEVLDVMWREGGATPDDPRPYLKTVMCRVVSIAALVRKMVRDEVT
LKLISLPGLDVSEQAEGEIIRQFLEAVGKQRAQIVGFNSSNADLPILYQRALANRVSAPTFCHRPDKPWEGVDYFNRYSD
FSIDLKDLVGGYGKAMPSLHELASSLGIPGKMGTDGADVIDLWRSGDIRKIVEYNQFDAISTYLVWLRTAYFSGMLTEDE
FVQEEHTLETLLLQEIESGSEHLALFLDAWKTLR

Specific function: Unknown

COG id: COG3298

COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30959; Mature: 30959

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKFITDNVVVFDVEWVPDPASGRRIYKIPDTASDDEVLDVMWREGGATPDDPRPYLKTV
CCEEEECCEEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH
MCRVVSIAALVRKMVRDEVTLKLISLPGLDVSEQAEGEIIRQFLEAVGKQRAQIVGFNSS
HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCC
NADLPILYQRALANRVSAPTFCHRPDKPWEGVDYFNRYSDFSIDLKDLVGGYGKAMPSLH
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCEEHHHHHCHHHHCCHHHH
ELASSLGIPGKMGTDGADVIDLWRSGDIRKIVEYNQFDAISTYLVWLRTAYFSGMLTEDE
HHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHH
FVQEEHTLETLLLQEIESGSEHLALFLDAWKTLR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYKFITDNVVVFDVEWVPDPASGRRIYKIPDTASDDEVLDVMWREGGATPDDPRPYLKTV
CCEEEECCEEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH
MCRVVSIAALVRKMVRDEVTLKLISLPGLDVSEQAEGEIIRQFLEAVGKQRAQIVGFNSS
HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCC
NADLPILYQRALANRVSAPTFCHRPDKPWEGVDYFNRYSDFSIDLKDLVGGYGKAMPSLH
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCEEHHHHHCHHHHCCHHHH
ELASSLGIPGKMGTDGADVIDLWRSGDIRKIVEYNQFDAISTYLVWLRTAYFSGMLTEDE
HHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHH
FVQEEHTLETLLLQEIESGSEHLALFLDAWKTLR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA