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The map label for this gene is 193212131

Identifier: 193212131

GI number: 193212131

Start: 493480

End: 494454

Strand: Direct

Name: 193212131

Synonym: Cpar_0462

Alternate gene names: NA

Gene position: 493480-494454 (Clockwise)

Preceding gene: 193212130

Following gene: 193212139

Centisome position: 21.56

GC content: 56.62

Gene sequence:

>975_bases
ATGTTCAGCTATCGAAGGGGCGGTTTGCGAACCGTCCTTTCGATTTTGGGCAAAACGGCTTTTTATTGCATGGACAATCT
CATTCTTATTGCGGTCTCTTTTACGGCGGGTCTGCTCATGCGCCGTTTCAGTCGTATGCCGGAGCAGACCCCTTTGGCGA
TGAATGCGTTCATTATTTACGTTTCATTGCCGGCCATGGTGCTGTTTTATCTTCACGGCCTCGATTTCAGCCCGGCGATG
TTCCTGCCCGCTTCGATGCCGTGGTTGACTTTCGGGCTTTCAGCGCTCTTCTTTGTCGTTGTTGGTCGGCTGCTCAAGCT
TCCGCGCGCGACAGTCGGGTCACTGATTCTCTGCGGCGGGCTGGGCAATACCTCGTTTTTCGGTTTTCCTATGATCGAGG
CGTTTTACGGGAAGCAGGGGATCGCGCACGGCATCATCATCGACCAGCTCGGCAGCTTCATGGTGGTCTCGATTCTCGGC
GTCACCGTAGCCGGGGTCTATTCGCATGGAAGTGCGGACGCGAGAAGCATCGTCAAGCGGGTGCTGTTGTTCCCCTCGTT
CATCGCTCTGATTGCGGCCGTGCTGCTCAACGATGTGGCCTATCCCGACTGGTTTCTGAATCTTATCAGACGCCTGAGTG
ACATGCTTGCCCCGATGGCGCTTTTCTCGGTCGGCTTTCAGTTCAATCCGGGGCACATCGGCAAAAGCCGAAACACGCTC
GCGCTGGGGCTTGCTTTCAAGCTTGCTGTGGTGCCTGCGGTGATGTTTCTGGTTTATGTGATGGTTGCGGGAATGCACGG
CCTGCCTGCGCGGATCACCATTTTCGAAGCGGCCATGCCAACCATGATAACCGGCGGCATTATCGCTGCCGAGCACCGGC
TCGATCCGCCCCTTGCCAACCTCATGGTGTCGCTCGGGTTGCTGGTCTCGTTCGTGACGCTTGCGATCTGGACGCTGCTT
CTCGGTGGTGTCTGA

Upstream 100 bases:

>100_bases
GAGCGCATCTGCACCAGCCGAACCAGAAGGGTAGAAAAGGACGTGCATCTTACTGGGCTTAGAGGAAAGAAGAAGTAGCG
CTGATTTTCCAGGATTTTTG

Downstream 100 bases:

>100_bases
TTGGCTGGTTGGGAGTTCTTACGCCTGTAATCTCAGCGGAAGTTCGAGGCCGTTGGCTTCGAGCAGGTCACGATCTGCGA
GAATTTCTTTTGTCGGGCCG

Product: auxin efflux carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MFSYRRGGLRTVLSILGKTAFYCMDNLILIAVSFTAGLLMRRFSRMPEQTPLAMNAFIIYVSLPAMVLFYLHGLDFSPAM
FLPASMPWLTFGLSALFFVVVGRLLKLPRATVGSLILCGGLGNTSFFGFPMIEAFYGKQGIAHGIIIDQLGSFMVVSILG
VTVAGVYSHGSADARSIVKRVLLFPSFIALIAAVLLNDVAYPDWFLNLIRRLSDMLAPMALFSVGFQFNPGHIGKSRNTL
ALGLAFKLAVVPAVMFLVYVMVAGMHGLPARITIFEAAMPTMITGGIIAAEHRLDPPLANLMVSLGLLVSFVTLAIWTLL
LGGV

Sequences:

>Translated_324_residues
MFSYRRGGLRTVLSILGKTAFYCMDNLILIAVSFTAGLLMRRFSRMPEQTPLAMNAFIIYVSLPAMVLFYLHGLDFSPAM
FLPASMPWLTFGLSALFFVVVGRLLKLPRATVGSLILCGGLGNTSFFGFPMIEAFYGKQGIAHGIIIDQLGSFMVVSILG
VTVAGVYSHGSADARSIVKRVLLFPSFIALIAAVLLNDVAYPDWFLNLIRRLSDMLAPMALFSVGFQFNPGHIGKSRNTL
ALGLAFKLAVVPAVMFLVYVMVAGMHGLPARITIFEAAMPTMITGGIIAAEHRLDPPLANLMVSLGLLVSFVTLAIWTLL
LGGV
>Mature_324_residues
MFSYRRGGLRTVLSILGKTAFYCMDNLILIAVSFTAGLLMRRFSRMPEQTPLAMNAFIIYVSLPAMVLFYLHGLDFSPAM
FLPASMPWLTFGLSALFFVVVGRLLKLPRATVGSLILCGGLGNTSFFGFPMIEAFYGKQGIAHGIIIDQLGSFMVVSILG
VTVAGVYSHGSADARSIVKRVLLFPSFIALIAAVLLNDVAYPDWFLNLIRRLSDMLAPMALFSVGFQFNPGHIGKSRNTL
ALGLAFKLAVVPAVMFLVYVMVAGMHGLPARITIFEAAMPTMITGGIIAAEHRLDPPLANLMVSLGLLVSFVTLAIWTLL
LGGV

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 35063; Mature: 35063

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSYRRGGLRTVLSILGKTAFYCMDNLILIAVSFTAGLLMRRFSRMPEQTPLAMNAFIIY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
VSLPAMVLFYLHGLDFSPAMFLPASMPWLTFGLSALFFVVVGRLLKLPRATVGSLILCGG
HHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEECC
LGNTSFFGFPMIEAFYGKQGIAHGIIIDQLGSFMVVSILGVTVAGVYSHGSADARSIVKR
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VLLFPSFIALIAAVLLNDVAYPDWFLNLIRRLSDMLAPMALFSVGFQFNPGHIGKSRNTL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
ALGLAFKLAVVPAVMFLVYVMVAGMHGLPARITIFEAAMPTMITGGIIAAEHRLDPPLAN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCEECCCCCCHHHH
LMVSLGLLVSFVTLAIWTLLLGGV
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSYRRGGLRTVLSILGKTAFYCMDNLILIAVSFTAGLLMRRFSRMPEQTPLAMNAFIIY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
VSLPAMVLFYLHGLDFSPAMFLPASMPWLTFGLSALFFVVVGRLLKLPRATVGSLILCGG
HHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEECC
LGNTSFFGFPMIEAFYGKQGIAHGIIIDQLGSFMVVSILGVTVAGVYSHGSADARSIVKR
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VLLFPSFIALIAAVLLNDVAYPDWFLNLIRRLSDMLAPMALFSVGFQFNPGHIGKSRNTL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
ALGLAFKLAVVPAVMFLVYVMVAGMHGLPARITIFEAAMPTMITGGIIAAEHRLDPPLAN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCEECCCCCCHHHH
LMVSLGLLVSFVTLAIWTLLLGGV
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]