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The map label for this gene is accD

Identifier: 193212073

GI number: 193212073

Start: 431335

End: 432174

Strand: Direct

Name: accD

Synonym: Cpar_0403

Alternate gene names: 193212073

Gene position: 431335-432174 (Clockwise)

Preceding gene: 193212069

Following gene: 193212075

Centisome position: 18.84

GC content: 57.26

Gene sequence:

>840_bases
ATGGTCTGGTTCAAACGGGGGATACCCTCCATCAAGACAACGGACAAGCGCGACACCCCTGAAGGGTTGTGGTCCAAATG
CGACGAATGCGGCGCTGCGTTGCACAAAAAACAGCTCGAAGATCACCTCTACACCTGCCCGGAGTGTGGTCATCACTTCC
GAATCAGTCCTGATCTCTACTTCTCGTTCCTGTTCGACGATGGGGCGTGGGATGAATTCGACGGCCAGCTCAGAGCTGCC
GATCCGCTTACCTTTGTCGATACGAAAAAGTATCCCGATCGCGTGCGCGACACGATGCAGAAATCGGGAAAGAGCGAAGC
GTGCCGGAACGCTACCGGTTCGATGGGTGGTTCCGCTGCGGTTATTTCCGCGATGGATTTCGGTTTCATCGGCGGCTCGA
TGGGCTCGGTGGTAGGTGAAAAGATTTCGCGGGCGGCTGACAAGAGCGTCGAATTGAACGCACCGCTCATATTGATTTCT
CAATCCGGCGGCGCACGCATGATGGAGGGCGCGTTCAGCCTCATGCAGATGGCCAAGACCTCAGCCCGTCTGACGCGACT
CGGTGAACGGAACATTCCATTCATCTCGCTCATGACCGATCCGACGATGGGCGGCATCAGCGCTTCGTATGCCATGCTTG
GCGATCTGAACATCAGCGAGCCGAAAGCGCTCATCGGCTTTGCCGGCCCGCGAGTTATCCGCGATACCATCAAGCGCGAC
CTGCCCGAAGGCTTCCAGCGCGCCGAGTTTCTCAAGGAGCACGGTTTCGTCGATATGATCGTTCACCGCAAGGACTTGCG
CTTGCAGCTCATCAAGCTGTTCAAGCACCTGCGGGGGTAA

Upstream 100 bases:

>100_bases
TGCAGTTCACAGGAGACTCCGGCAGCAGCCTGTTTTTGAGATGTCGTGGCGAGTTTATATCTTGAATTCCAAAGTAAACT
CTTTAGTGGTAATAATAAAA

Downstream 100 bases:

>100_bases
ACGGAGTGGTATCGGATAGTGTTCTTCAAGGGCGGTTTGTGAACCGCCCTTTTTTTTGTGGGCTGAGGAGGGAAATGGAC
TGAGTGGACAGTGAAAATGT

Product: acetyl-CoA carboxylase, carboxyl transferase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MVWFKRGIPSIKTTDKRDTPEGLWSKCDECGAALHKKQLEDHLYTCPECGHHFRISPDLYFSFLFDDGAWDEFDGQLRAA
DPLTFVDTKKYPDRVRDTMQKSGKSEACRNATGSMGGSAAVISAMDFGFIGGSMGSVVGEKISRAADKSVELNAPLILIS
QSGGARMMEGAFSLMQMAKTSARLTRLGERNIPFISLMTDPTMGGISASYAMLGDLNISEPKALIGFAGPRVIRDTIKRD
LPEGFQRAEFLKEHGFVDMIVHRKDLRLQLIKLFKHLRG

Sequences:

>Translated_279_residues
MVWFKRGIPSIKTTDKRDTPEGLWSKCDECGAALHKKQLEDHLYTCPECGHHFRISPDLYFSFLFDDGAWDEFDGQLRAA
DPLTFVDTKKYPDRVRDTMQKSGKSEACRNATGSMGGSAAVISAMDFGFIGGSMGSVVGEKISRAADKSVELNAPLILIS
QSGGARMMEGAFSLMQMAKTSARLTRLGERNIPFISLMTDPTMGGISASYAMLGDLNISEPKALIGFAGPRVIRDTIKRD
LPEGFQRAEFLKEHGFVDMIVHRKDLRLQLIKLFKHLRG
>Mature_279_residues
MVWFKRGIPSIKTTDKRDTPEGLWSKCDECGAALHKKQLEDHLYTCPECGHHFRISPDLYFSFLFDDGAWDEFDGQLRAA
DPLTFVDTKKYPDRVRDTMQKSGKSEACRNATGSMGGSAAVISAMDFGFIGGSMGSVVGEKISRAADKSVELNAPLILIS
QSGGARMMEGAFSLMQMAKTSARLTRLGERNIPFISLMTDPTMGGISASYAMLGDLNISEPKALIGFAGPRVIRDTIKRD
LPEGFQRAEFLKEHGFVDMIVHRKDLRLQLIKLFKHLRG

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family

Homologues:

Organism=Escherichia coli, GI1788655, Length=277, Percent_Identity=50.5415162454874, Blast_Score=296, Evalue=1e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACCD_CHLP8 (B3QL38)

Other databases:

- EMBL:   CP001099
- RefSeq:   YP_001998026.1
- GeneID:   6419317
- GenomeReviews:   CP001099_GR
- KEGG:   cpc:Cpar_0403
- HOGENOM:   HBG285696
- OMA:   LEHGMVD
- ProtClustDB:   CLSK637819
- HAMAP:   MF_01395
- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762
- PRINTS:   PR01070
- TIGRFAMs:   TIGR00515

Pfam domain/function: PF01039 Carboxyl_trans

EC number: =6.4.1.2

Molecular weight: Translated: 30903; Mature: 30903

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWFKRGIPSIKTTDKRDTPEGLWSKCDECGAALHKKQLEDHLYTCPECGHHFRISPDLY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHE
FSFLFDDGAWDEFDGQLRAADPLTFVDTKKYPDRVRDTMQKSGKSEACRNATGSMGGSAA
EEEEECCCCCCCCCCCEECCCCEEEECCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCHH
VISAMDFGFIGGSMGSVVGEKISRAADKSVELNAPLILISQSGGARMMEGAFSLMQMAKT
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHH
SARLTRLGERNIPFISLMTDPTMGGISASYAMLGDLNISEPKALIGFAGPRVIRDTIKRD
HHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHEECCCCCCCHHHHCCCCHHHHHHHHHHH
LPEGFQRAEFLKEHGFVDMIVHRKDLRLQLIKLFKHLRG
HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVWFKRGIPSIKTTDKRDTPEGLWSKCDECGAALHKKQLEDHLYTCPECGHHFRISPDLY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHE
FSFLFDDGAWDEFDGQLRAADPLTFVDTKKYPDRVRDTMQKSGKSEACRNATGSMGGSAA
EEEEECCCCCCCCCCCEECCCCEEEECCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCHH
VISAMDFGFIGGSMGSVVGEKISRAADKSVELNAPLILISQSGGARMMEGAFSLMQMAKT
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHH
SARLTRLGERNIPFISLMTDPTMGGISASYAMLGDLNISEPKALIGFAGPRVIRDTIKRD
HHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHEECCCCCCCHHHHCCCCHHHHHHHHHHH
LPEGFQRAEFLKEHGFVDMIVHRKDLRLQLIKLFKHLRG
HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA