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The map label for this gene is pyrF [H]

Identifier: 193211749

GI number: 193211749

Start: 83606

End: 84430

Strand: Direct

Name: pyrF [H]

Synonym: Cpar_0074

Alternate gene names: 193211749

Gene position: 83606-84430 (Clockwise)

Preceding gene: 193211739

Following gene: 193211750

Centisome position: 3.65

GC content: 59.64

Gene sequence:

>825_bases
ATGAATTCATCAAGGAACAAGGCAAACGAAAGAATTGCTTCGCTGCGCTCGATGCTCTGTGTAGGGCTTGATAGCGATCC
GGCGAAAATTCCCGCTCTTTTTCAGTCGATGCAGCATCCGGTGCAGGAGTTCAACCGCGCCGTGATCAGAGCGACGCGCG
ATCATGCGGCTGCCTACAAAGTCAATACCGCATTCTACGAGTCGCGAGGGCTTGCTGGAATGCGCGATCTCGAAGAGACG
CTGCAGGCGCTTCCGCCGGAGTGCCTGAGCATTGCCGATGCCAAGCGCGCCGACATCGGCAACACCAGTCGACAGTACGC
GAAGGCCTTTTTCGAGGCGTGGCCGTTCGATGCCATTACGGTGGCGCCCTACATGGGCTTCGATTCGCTCGAACCCTTTT
TCGAGTACGAGGACAAGCTGGTGTTCGTGCTCTGCCTGACCTCCAATCCCGGTTCGCGCGATTTCGAGGAGCGGATTGTC
GAGGATGGTCGTCCTCTTTATCGTTCTGTGCTTGAGCGGGTCAGCGCCTGGCAGCGCAACGGGAACGCAGGTGTCGTGGT
TGGAGCCACCAAGCCTGGCCTGTTGCAGGAGCTCCGTCGAGACGCGCCCGACCTGTTTTTCCTCATTCCGGGGGTTGGCG
CGCAGGGCGGTTCGATGCAGGAGGCGGTTTCGCACGGGGCTGATCCGGAAGGCCGGAGTGCCGTGGTCAATGTGAGCCGC
GCCCTCATCTTTCCGGATGGCGAGTTCAGCAGCGTCGAGCAGTTCGAGGCGGCGGTGAACCGGGAAGCCGGGAAGCTGCA
TGAAAGTATGATAGGTATGTTGTGA

Upstream 100 bases:

>100_bases
GCAGCGCAGTTTCTTCGCTTCGTCTATCATGTTGCATCATGTATATTGCCATGACAAAACAGCGTCAGGGTTAACTATTT
TTTGGGTTTTTATTCCAGGT

Downstream 100 bases:

>100_bases
TTTTAGTGTGCAATAACATAGATATATTGGGCAAGCCTCCGGTTGATACCGGCGTCTTGTCTGCATGAAAACGTAATCAA
GGAATTGGAATATGTGTGGC

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MNSSRNKANERIASLRSMLCVGLDSDPAKIPALFQSMQHPVQEFNRAVIRATRDHAAAYKVNTAFYESRGLAGMRDLEET
LQALPPECLSIADAKRADIGNTSRQYAKAFFEAWPFDAITVAPYMGFDSLEPFFEYEDKLVFVLCLTSNPGSRDFEERIV
EDGRPLYRSVLERVSAWQRNGNAGVVVGATKPGLLQELRRDAPDLFFLIPGVGAQGGSMQEAVSHGADPEGRSAVVNVSR
ALIFPDGEFSSVEQFEAAVNREAGKLHESMIGML

Sequences:

>Translated_274_residues
MNSSRNKANERIASLRSMLCVGLDSDPAKIPALFQSMQHPVQEFNRAVIRATRDHAAAYKVNTAFYESRGLAGMRDLEET
LQALPPECLSIADAKRADIGNTSRQYAKAFFEAWPFDAITVAPYMGFDSLEPFFEYEDKLVFVLCLTSNPGSRDFEERIV
EDGRPLYRSVLERVSAWQRNGNAGVVVGATKPGLLQELRRDAPDLFFLIPGVGAQGGSMQEAVSHGADPEGRSAVVNVSR
ALIFPDGEFSSVEQFEAAVNREAGKLHESMIGML
>Mature_274_residues
MNSSRNKANERIASLRSMLCVGLDSDPAKIPALFQSMQHPVQEFNRAVIRATRDHAAAYKVNTAFYESRGLAGMRDLEET
LQALPPECLSIADAKRADIGNTSRQYAKAFFEAWPFDAITVAPYMGFDSLEPFFEYEDKLVFVLCLTSNPGSRDFEERIV
EDGRPLYRSVLERVSAWQRNGNAGVVVGATKPGLLQELRRDAPDLFFLIPGVGAQGGSMQEAVSHGADPEGRSAVVNVSR
ALIFPDGEFSSVEQFEAAVNREAGKLHESMIGML

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 30166; Mature: 30166

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSRNKANERIASLRSMLCVGLDSDPAKIPALFQSMQHPVQEFNRAVIRATRDHAAAYK
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VNTAFYESRGLAGMRDLEETLQALPPECLSIADAKRADIGNTSRQYAKAFFEAWPFDAIT
HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEE
VAPYMGFDSLEPFFEYEDKLVFVLCLTSNPGSRDFEERIVEDGRPLYRSVLERVSAWQRN
ECHHCCCCCCCHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCC
GNAGVVVGATKPGLLQELRRDAPDLFFLIPGVGAQGGSMQEAVSHGADPEGRSAVVNVSR
CCCEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHEEHHH
ALIFPDGEFSSVEQFEAAVNREAGKLHESMIGML
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSSRNKANERIASLRSMLCVGLDSDPAKIPALFQSMQHPVQEFNRAVIRATRDHAAAYK
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VNTAFYESRGLAGMRDLEETLQALPPECLSIADAKRADIGNTSRQYAKAFFEAWPFDAIT
HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEE
VAPYMGFDSLEPFFEYEDKLVFVLCLTSNPGSRDFEERIVEDGRPLYRSVLERVSAWQRN
ECHHCCCCCCCHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCC
GNAGVVVGATKPGLLQELRRDAPDLFFLIPGVGAQGGSMQEAVSHGADPEGRSAVVNVSR
CCCEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHEEHHH
ALIFPDGEFSSVEQFEAAVNREAGKLHESMIGML
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA