Click here to switch to the map view.

The map label for this gene is yeiT [H]

Identifier: 193211705

GI number: 193211705

Start: 35871

End: 37607

Strand: Direct

Name: yeiT [H]

Synonym: Cpar_0030

Alternate gene names: 193211705

Gene position: 35871-37607 (Clockwise)

Preceding gene: 193211704

Following gene: 193211706

Centisome position: 1.57

GC content: 61.2

Gene sequence:

>1737_bases
ATGAATGCAGAATCAAATCCGATTCTCGATTTTGCGACCGAGTATGTCTTCCCGGAATTCAGCGAATTGACGGGAACCGA
CAAGATTGTCGCCTTCGGGGATCAAAGTCATAAATGTCCGGTCTATGTCCGGCAGACCCCGCCCTGCTCGGCGGAGTGCC
CGGCCGGGGAGGACATCCGCGCCATCAACCGCTACATCAGCGGCATCGATCAGTCCGACGATCCGCTGAAAGCGGCCTGG
GAGACGGCGGTGAACACCAACCCCTTCCCGGCAGTGATGGGCCGCATCTGCCCGCATCCGTGCCAGGGTGGCTGCAACCG
CGGCAAGCACGACGAGAGCGTGGCTATCAACGCGGTCGAGCAGGTGATCGGCAACTACGGTATCGAGAACGGGCTCAAAT
TGCCCGCCCCCGGCCCTGACACGGGCAAGAAAGTTGCGGTGATCGGCGGTGGCCCGGCTGGCCTTTCGGCAGCTTATCAG
CTTCGCCGCAAGGGGCACGCGGTCACGATTTACGACGCCAACGAGAAGCTCGGCGGCATGGTGCTCTACGGCATCATGGG
CTACCGCGTGGATCGCAAGGTGCTCGAAGCTGAAATCGGCCGCATCATCGACCTCGGCGTCGAAACGAAAATGGGCGTTC
GCGTCGGTGAAGATGTTACCCTCGAACAGCTCGAACAGGAGTACGACGCGGTTTTCCTCGGCGTCGGCGCGCAGAAAGGG
CGCGGCCTGCCGGTTCCCGGTTTCGAGGGAACGCCGGGCGCGACCAACGCCATCGAGTTTCTCAGGAATTACGAGGTTAT
GGGCGACGATGTGCCCGTAGGTAAAAATGTCGTCATCATCGGAGACGGCAACGTGGCTATGGACGTGGCGCGCCTCGCTC
TTCGCCTCGGATCCAAGGCAACCGTCATTTCGGGCGTTCCGCGCGAGGAGATGGCCTGCTTCGACAATGAATTTGACGAC
GCGGCCAACGAAGGCACGACCATGTACTTCCAGACCGGCACGGCGGAGATTCTCGGCGGCGCTTCGGGCGTCACCGGCCT
GCGCTGCACCAAAATGGTCAAAAAAGAGAAGGGCGAAGAGGGCTGGAACTCTCCGATTCCTTTCCTGCGCTACAAACCGA
GCGGCGAGACTTTCGAGATCGAAGCCGACATGGTGGTTGCGGCTATCGGCCAGGCGACCGACTTTGCAGGCCTCGGCGAC
GCAGGCACCAAAGGCCCCTGGATGAAGGTTGATCGCAACTTCCGCATTCCGGGCCACGACAAGCTCTTCAGCGGCGGCGA
CGCTCTGAAGGTCGATCTTATCACTACGGCGGTCGGCCACGGTCGCAAGGCCGCAGCATCGATCGACGCTTTCCTGAAAG
GCGAGCCGATGCCCGAAACGCCCTACAGCGAAATCACCAAGGCGCACAAGCAGGATCTGCTCTACTTTCTGCACACCCCG
CAGGCAAAGCGCACCACCATCGAGCCGGAAGAGGTTGTGGGCAATCACGACGAGCTGCTCGAAGCGCTGACGCACGAAGA
GGCCAAGTCCGAGTCGGAGCGCTGCATGAGCTGCGGCTTCTGTTTCGACTGCAAGCAGTGCGTCTCGTTCTGTCCGCAGG
AGGCCATCACGCGCTTCCGCGACAATCCGGCAGGTGAAAAAGTCTATACCAACTATGCGAAGTGCGTCGGCTGTCATCTC
TGCTCCCTGGTCTGCCCCTGCGGGTACATCCAGATGGGCATGGGCGACGGGCTCTGA

Upstream 100 bases:

>100_bases
AGAGTTCTGGAAGAACTCCGGTTTCTGCGCTCCAGCCGCCTTGTCCCCGGACTTCTCACGACGATCAACAGCGGCGCAAC
ATTAACCTATGGAGAATCTC

Downstream 100 bases:

>100_bases
GCCTCCAGCCGAAGCTTTTCGTCAACCGAAACGGTCGCAACGAATATGATGGAAGATGTGATCAAAATGGTCGAACAGGC
CATCGAAACCTCGTCGCACT

Product: putative glutamate synthase (NADPH) small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MNAESNPILDFATEYVFPEFSELTGTDKIVAFGDQSHKCPVYVRQTPPCSAECPAGEDIRAINRYISGIDQSDDPLKAAW
ETAVNTNPFPAVMGRICPHPCQGGCNRGKHDESVAINAVEQVIGNYGIENGLKLPAPGPDTGKKVAVIGGGPAGLSAAYQ
LRRKGHAVTIYDANEKLGGMVLYGIMGYRVDRKVLEAEIGRIIDLGVETKMGVRVGEDVTLEQLEQEYDAVFLGVGAQKG
RGLPVPGFEGTPGATNAIEFLRNYEVMGDDVPVGKNVVIIGDGNVAMDVARLALRLGSKATVISGVPREEMACFDNEFDD
AANEGTTMYFQTGTAEILGGASGVTGLRCTKMVKKEKGEEGWNSPIPFLRYKPSGETFEIEADMVVAAIGQATDFAGLGD
AGTKGPWMKVDRNFRIPGHDKLFSGGDALKVDLITTAVGHGRKAAASIDAFLKGEPMPETPYSEITKAHKQDLLYFLHTP
QAKRTTIEPEEVVGNHDELLEALTHEEAKSESERCMSCGFCFDCKQCVSFCPQEAITRFRDNPAGEKVYTNYAKCVGCHL
CSLVCPCGYIQMGMGDGL

Sequences:

>Translated_578_residues
MNAESNPILDFATEYVFPEFSELTGTDKIVAFGDQSHKCPVYVRQTPPCSAECPAGEDIRAINRYISGIDQSDDPLKAAW
ETAVNTNPFPAVMGRICPHPCQGGCNRGKHDESVAINAVEQVIGNYGIENGLKLPAPGPDTGKKVAVIGGGPAGLSAAYQ
LRRKGHAVTIYDANEKLGGMVLYGIMGYRVDRKVLEAEIGRIIDLGVETKMGVRVGEDVTLEQLEQEYDAVFLGVGAQKG
RGLPVPGFEGTPGATNAIEFLRNYEVMGDDVPVGKNVVIIGDGNVAMDVARLALRLGSKATVISGVPREEMACFDNEFDD
AANEGTTMYFQTGTAEILGGASGVTGLRCTKMVKKEKGEEGWNSPIPFLRYKPSGETFEIEADMVVAAIGQATDFAGLGD
AGTKGPWMKVDRNFRIPGHDKLFSGGDALKVDLITTAVGHGRKAAASIDAFLKGEPMPETPYSEITKAHKQDLLYFLHTP
QAKRTTIEPEEVVGNHDELLEALTHEEAKSESERCMSCGFCFDCKQCVSFCPQEAITRFRDNPAGEKVYTNYAKCVGCHL
CSLVCPCGYIQMGMGDGL
>Mature_578_residues
MNAESNPILDFATEYVFPEFSELTGTDKIVAFGDQSHKCPVYVRQTPPCSAECPAGEDIRAINRYISGIDQSDDPLKAAW
ETAVNTNPFPAVMGRICPHPCQGGCNRGKHDESVAINAVEQVIGNYGIENGLKLPAPGPDTGKKVAVIGGGPAGLSAAYQ
LRRKGHAVTIYDANEKLGGMVLYGIMGYRVDRKVLEAEIGRIIDLGVETKMGVRVGEDVTLEQLEQEYDAVFLGVGAQKG
RGLPVPGFEGTPGATNAIEFLRNYEVMGDDVPVGKNVVIIGDGNVAMDVARLALRLGSKATVISGVPREEMACFDNEFDD
AANEGTTMYFQTGTAEILGGASGVTGLRCTKMVKKEKGEEGWNSPIPFLRYKPSGETFEIEADMVVAAIGQATDFAGLGD
AGTKGPWMKVDRNFRIPGHDKLFSGGDALKVDLITTAVGHGRKAAASIDAFLKGEPMPETPYSEITKAHKQDLLYFLHTP
QAKRTTIEPEEVVGNHDELLEALTHEEAKSESERCMSCGFCFDCKQCVSFCPQEAITRFRDNPAGEKVYTNYAKCVGCHL
CSLVCPCGYIQMGMGDGL

Specific function: Unknown

COG id: COG0493

COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli glutamate synthase [NADPH] small chain (GltD) and to E.coli AegA [H]

Homologues:

Organism=Homo sapiens, GI119943098, Length=444, Percent_Identity=24.7747747747748, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI111118983, Length=165, Percent_Identity=32.1212121212121, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI111118981, Length=165, Percent_Identity=32.1212121212121, Blast_Score=70, Evalue=6e-12,
Organism=Escherichia coli, GI1788811, Length=410, Percent_Identity=31.7073170731707, Blast_Score=170, Evalue=3e-43,
Organism=Escherichia coli, GI1788468, Length=413, Percent_Identity=32.4455205811138, Blast_Score=169, Evalue=5e-43,
Organism=Escherichia coli, GI87082180, Length=444, Percent_Identity=30.6306306306306, Blast_Score=166, Evalue=5e-42,
Organism=Escherichia coli, GI1789243, Length=534, Percent_Identity=28.2771535580524, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1789606, Length=440, Percent_Identity=31.8181818181818, Blast_Score=152, Evalue=6e-38,
Organism=Caenorhabditis elegans, GI17570289, Length=447, Percent_Identity=29.3064876957494, Blast_Score=145, Evalue=8e-35,
Organism=Caenorhabditis elegans, GI71984108, Length=291, Percent_Identity=29.553264604811, Blast_Score=82, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17543860, Length=182, Percent_Identity=31.8681318681319, Blast_Score=73, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6320030, Length=448, Percent_Identity=27.4553571428571, Blast_Score=141, Evalue=3e-34,
Organism=Drosophila melanogaster, GI28574881, Length=442, Percent_Identity=29.8642533936652, Blast_Score=167, Evalue=3e-41,
Organism=Drosophila melanogaster, GI24665539, Length=442, Percent_Identity=29.8642533936652, Blast_Score=167, Evalue=3e-41,
Organism=Drosophila melanogaster, GI24665547, Length=442, Percent_Identity=29.8642533936652, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI24665543, Length=442, Percent_Identity=29.8642533936652, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI24640763, Length=445, Percent_Identity=26.5168539325843, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI18858217, Length=445, Percent_Identity=26.5168539325843, Blast_Score=104, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR016040
- InterPro:   IPR001327
- InterPro:   IPR000103 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 62192; Mature: 62192

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAESNPILDFATEYVFPEFSELTGTDKIVAFGDQSHKCPVYVRQTPPCSAECPAGEDIR
CCCCCCCHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCHHH
AINRYISGIDQSDDPLKAAWETAVNTNPFPAVMGRICPHPCQGGCNRGKHDESVAINAVE
HHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
QVIGNYGIENGLKLPAPGPDTGKKVAVIGGGPAGLSAAYQLRRKGHAVTIYDANEKLGGM
HHHHHCCCCCCEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCE
VLYGIMGYRVDRKVLEAEIGRIIDLGVETKMGVRVGEDVTLEQLEQEYDAVFLGVGAQKG
EEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHCEEEEECCCCCC
RGLPVPGFEGTPGATNAIEFLRNYEVMGDDVPVGKNVVIIGDGNVAMDVARLALRLGSKA
CCCCCCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCC
TVISGVPREEMACFDNEFDDAANEGTTMYFQTGTAEILGGASGVTGLRCTKMVKKEKGEE
EEECCCCHHHHHHHCCCHHHCCCCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHCCCC
GWNSPIPFLRYKPSGETFEIEADMVVAAIGQATDFAGLGDAGTKGPWMKVDRNFRIPGHD
CCCCCCCCEEECCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
KLFSGGDALKVDLITTAVGHGRKAAASIDAFLKGEPMPETPYSEITKAHKQDLLYFLHTP
CEECCCCEEEEEEEEHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCEEEEEECC
QAKRTTIEPEEVVGNHDELLEALTHEEAKSESERCMSCGFCFDCKQCVSFCPQEAITRFR
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHC
DNPAGEKVYTNYAKCVGCHLCSLVCPCGYIQMGMGDGL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
>Mature Secondary Structure
MNAESNPILDFATEYVFPEFSELTGTDKIVAFGDQSHKCPVYVRQTPPCSAECPAGEDIR
CCCCCCCHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCHHH
AINRYISGIDQSDDPLKAAWETAVNTNPFPAVMGRICPHPCQGGCNRGKHDESVAINAVE
HHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
QVIGNYGIENGLKLPAPGPDTGKKVAVIGGGPAGLSAAYQLRRKGHAVTIYDANEKLGGM
HHHHHCCCCCCEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCE
VLYGIMGYRVDRKVLEAEIGRIIDLGVETKMGVRVGEDVTLEQLEQEYDAVFLGVGAQKG
EEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHCEEEEECCCCCC
RGLPVPGFEGTPGATNAIEFLRNYEVMGDDVPVGKNVVIIGDGNVAMDVARLALRLGSKA
CCCCCCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCC
TVISGVPREEMACFDNEFDDAANEGTTMYFQTGTAEILGGASGVTGLRCTKMVKKEKGEE
EEECCCCHHHHHHHCCCHHHCCCCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHCCCC
GWNSPIPFLRYKPSGETFEIEADMVVAAIGQATDFAGLGDAGTKGPWMKVDRNFRIPGHD
CCCCCCCCEEECCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
KLFSGGDALKVDLITTAVGHGRKAAASIDAFLKGEPMPETPYSEITKAHKQDLLYFLHTP
CEECCCCEEEEEEEEHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCEEEEEECC
QAKRTTIEPEEVVGNHDELLEALTHEEAKSESERCMSCGFCFDCKQCVSFCPQEAITRFR
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHC
DNPAGEKVYTNYAKCVGCHLCSLVCPCGYIQMGMGDGL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]