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The map label for this gene is dsvB [H]

Identifier: 193211704

GI number: 193211704

Start: 34583

End: 35662

Strand: Direct

Name: dsvB [H]

Synonym: Cpar_0029

Alternate gene names: 193211704

Gene position: 34583-35662 (Clockwise)

Preceding gene: 193211703

Following gene: 193211705

Centisome position: 1.51

GC content: 61.94

Gene sequence:

>1080_bases
ATGAGCAGTCAGGAAAGAACCTGGAAGACCATAGAGTCCGGTCCTCATACCTACGAGGAGGCGCTGCATCCCGTGGTCAG
GAAGAATTACGGAAAGTGGAAATATCACGAGATCCCCAAGCCGGGCGTGCTCAAGCACGTGGCCGAGAGCGGTGACACCA
TCTGGACGGTCAGGGCCGGTACGCAGCGGCAGGATACCGTTGACATGCTTCGCAGCCTGTGCGACGTGGCCGACAAGTAC
TGTGACGGCTTCCTTCGCTTTACGGTGCGCAACAACGTCGAGTTCCTGACGCCGAACGCCGAAAACGTCGAGCCGATGAT
CGCCGAGCTCGAATCGATGGGCTTCCCGGTCGGCGGCACCGGCATGTGTGTCTCGTCGGTTTCGCACACCCAGGGCTGGC
TGCACTGCGACATTCCGGCTACCGACGCTTCGGGCGTGGTGAAGTCGATGATGGACTCGCTCTACAACGAGTTCAAGGAT
ATGCAGATGCCCAACAAGGTGCGTCTTTCGACCTCCTGCTGCGCTATCAACTGTGGTGGCCAGGCCGACATCGCCGTGGT
GGTCAAGCACACCCGTCCGCCGCGCATCAACCACGATCATCTGGTCACCACCTGCGAGCTGCCGAAAGCCGTGGCGCGCT
GCCCGGTTGCGGCTATCCGCCCGACGGTGGTCGATGGCAAGAAGACGCTCATGGTCGATGAGGCCAAGTGCATCTGCTGC
GGCGCCTGCTTCGGCGCCTGCCCCGCCATGGAGATCAACCATCCCGAGCACTCGAAATTCGCCATCTGGGTTGGCGGCAA
AAACAGCAACGCCCGCGTGAAGCCTTCGACCATGAGCCTCGTGGCGCACAACCTCCCGAACAACCCGCCGCGCTGGCCGG
AAGTGACCGAGGTGGTTGGCCGCATCCTGAAGGCCTACAAGGCTGGCGGACGCCCGTGGGAGCGCGTCGGCGAGTGGATC
GACCGCATCGGCTGGAAGCGCTTCTTCGAGGAGACCGGCCTGACCTTTGACGAGAACATGATCGACAGCTATCGTCACGC
CCGCACGACCTTCAACCAGTCGGCACACGTCCGTTTCTAA

Upstream 100 bases:

>100_bases
TCATTCTGCGGAATCGAGAGTCAGATAAGATCAACAGAACATTCACTGTCGCGCCAGTCCTGTCAAAAAGGCTGGTGCGT
CCCAACCTACAGGAAAGAGC

Downstream 100 bases:

>100_bases
GCTGAATTGTGCGTCACTGTTGATCTGTTGCGAAGCCCGATGACTGCGTTGGGTGGTGCTCGAAATCCTCACGCTCCCCG
GCTTGAAAGCCGGGGCAATG

Product: sulfite reductase, dissimilatory-type subunit beta

Products: NA

Alternate protein names: Desulfoviridin subunit beta; Hydrogensulfite reductase subunit beta [H]

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MSSQERTWKTIESGPHTYEEALHPVVRKNYGKWKYHEIPKPGVLKHVAESGDTIWTVRAGTQRQDTVDMLRSLCDVADKY
CDGFLRFTVRNNVEFLTPNAENVEPMIAELESMGFPVGGTGMCVSSVSHTQGWLHCDIPATDASGVVKSMMDSLYNEFKD
MQMPNKVRLSTSCCAINCGGQADIAVVVKHTRPPRINHDHLVTTCELPKAVARCPVAAIRPTVVDGKKTLMVDEAKCICC
GACFGACPAMEINHPEHSKFAIWVGGKNSNARVKPSTMSLVAHNLPNNPPRWPEVTEVVGRILKAYKAGGRPWERVGEWI
DRIGWKRFFEETGLTFDENMIDSYRHARTTFNQSAHVRF

Sequences:

>Translated_359_residues
MSSQERTWKTIESGPHTYEEALHPVVRKNYGKWKYHEIPKPGVLKHVAESGDTIWTVRAGTQRQDTVDMLRSLCDVADKY
CDGFLRFTVRNNVEFLTPNAENVEPMIAELESMGFPVGGTGMCVSSVSHTQGWLHCDIPATDASGVVKSMMDSLYNEFKD
MQMPNKVRLSTSCCAINCGGQADIAVVVKHTRPPRINHDHLVTTCELPKAVARCPVAAIRPTVVDGKKTLMVDEAKCICC
GACFGACPAMEINHPEHSKFAIWVGGKNSNARVKPSTMSLVAHNLPNNPPRWPEVTEVVGRILKAYKAGGRPWERVGEWI
DRIGWKRFFEETGLTFDENMIDSYRHARTTFNQSAHVRF
>Mature_358_residues
SSQERTWKTIESGPHTYEEALHPVVRKNYGKWKYHEIPKPGVLKHVAESGDTIWTVRAGTQRQDTVDMLRSLCDVADKYC
DGFLRFTVRNNVEFLTPNAENVEPMIAELESMGFPVGGTGMCVSSVSHTQGWLHCDIPATDASGVVKSMMDSLYNEFKDM
QMPNKVRLSTSCCAINCGGQADIAVVVKHTRPPRINHDHLVTTCELPKAVARCPVAAIRPTVVDGKKTLMVDEAKCICCG
ACFGACPAMEINHPEHSKFAIWVGGKNSNARVKPSTMSLVAHNLPNNPPRWPEVTEVVGRILKAYKAGGRPWERVGEWID
RIGWKRFFEETGLTFDENMIDSYRHARTTFNQSAHVRF

Specific function: Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration, a process catalyzed by the sulfate-reducing bacteria [H]

COG id: COG2221

COG function: function code C; Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011808
- InterPro:   IPR005117
- InterPro:   IPR006067 [H]

Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]

EC number: =1.8.99.3 [H]

Molecular weight: Translated: 40147; Mature: 40016

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQERTWKTIESGPHTYEEALHPVVRKNYGKWKYHEIPKPGVLKHVAESGDTIWTVRAG
CCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHCCCEEEEEECC
TQRQDTVDMLRSLCDVADKYCDGFLRFTVRNNVEFLTPNAENVEPMIAELESMGFPVGGT
CCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEEECCCCCCCCHHHHHHHHCCCCCCCC
GMCVSSVSHTQGWLHCDIPATDASGVVKSMMDSLYNEFKDMQMPNKVRLSTSCCAINCGG
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCC
QADIAVVVKHTRPPRINHDHLVTTCELPKAVARCPVAAIRPTVVDGKKTLMVDEAKCICC
CCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHCCHHHHCCEEECCCEEEEEECCCEEEE
GACFGACPAMEINHPEHSKFAIWVGGKNSNARVKPSTMSLVAHNLPNNPPRWPEVTEVVG
HHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEECCHHHHHHHHCCCCCCCCCCHHHHHHH
RILKAYKAGGRPWERVGEWIDRIGWKRFFEETGLTFDENMIDSYRHARTTFNQSAHVRF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SSQERTWKTIESGPHTYEEALHPVVRKNYGKWKYHEIPKPGVLKHVAESGDTIWTVRAG
CCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHCCCEEEEEECC
TQRQDTVDMLRSLCDVADKYCDGFLRFTVRNNVEFLTPNAENVEPMIAELESMGFPVGGT
CCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEEECCCCCCCCHHHHHHHHCCCCCCCC
GMCVSSVSHTQGWLHCDIPATDASGVVKSMMDSLYNEFKDMQMPNKVRLSTSCCAINCGG
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCC
QADIAVVVKHTRPPRINHDHLVTTCELPKAVARCPVAAIRPTVVDGKKTLMVDEAKCICC
CCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHCCHHHHCCEEECCCEEEEEECCCEEEE
GACFGACPAMEINHPEHSKFAIWVGGKNSNARVKPSTMSLVAHNLPNNPPRWPEVTEVVG
HHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEECCHHHHHHHHCCCCCCCCCCHHHHHHH
RILKAYKAGGRPWERVGEWIDRIGWKRFFEETGLTFDENMIDSYRHARTTFNQSAHVRF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7887608; 1555572 [H]