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The map label for this gene is yajC [H]

Identifier: 192291547

GI number: 192291547

Start: 3418554

End: 3418994

Strand: Reverse

Name: yajC [H]

Synonym: Rpal_3173

Alternate gene names: 192291547

Gene position: 3418994-3418554 (Counterclockwise)

Preceding gene: 192291550

Following gene: 192291546

Centisome position: 59.52

GC content: 62.13

Gene sequence:

>441_bases
ATGTTCGTTACGCCCGCTTACGCCCAGGCTGCTGCTGCTGCTGGCGGCGACGCCAACAGCATGATCATGTCGCTGCTGCC
GTTCGCGCTGATCTTTGTCATCATGTATTTCCTGATCCTGCGCCCGCAGCAGAAGAAGGTCAAAGAGCACGCCGAGATGG
TGAAGAACATTCGCCGCGGCGATACCATCATCACCTCGGGCGGTCTGGTCGGCAAGGTGACCAAGGTGATCGACGACGAT
ACCGTCGAGTTCGAACTCGCCGACGGCATTCGCGCGCGCCAGATGCGCCAGATGATCACCGGCGTCCGCGCCAAGGGCGA
ACCGGTCAAGGATGCTCCCGAAGCCAACGGCAAGGCCAAGGGCAAGAAGGACAAGGACGCTCCGGCCAAGACCGAGGGCG
ACAAGACCGAACCGGCGAAGGACGACACCGCGTCGAGCTGA

Upstream 100 bases:

>100_bases
TGCAATTGGGACCGCGGCGGTTATAGTCCGCGCGAATTTGCGCCCCCCGGCCGACGCTTTCCGCGCCGGGCCGGCTCGCT
TGCTTTCACGGGGAATCCGA

Downstream 100 bases:

>100_bases
TGCTTGGACGCTCCGCCTCTTTCGGTTTCTGACGGGACAACTCGATGCTTTATATCTCACGGTGGAAGGCGCTGGCGATC
ATCCTGACGGCGCTGGCAGT

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MFVTPAYAQAAAAAGGDANSMIMSLLPFALIFVIMYFLILRPQQKKVKEHAEMVKNIRRGDTIITSGGLVGKVTKVIDDD
TVEFELADGIRARQMRQMITGVRAKGEPVKDAPEANGKAKGKKDKDAPAKTEGDKTEPAKDDTASS

Sequences:

>Translated_146_residues
MFVTPAYAQAAAAAGGDANSMIMSLLPFALIFVIMYFLILRPQQKKVKEHAEMVKNIRRGDTIITSGGLVGKVTKVIDDD
TVEFELADGIRARQMRQMITGVRAKGEPVKDAPEANGKAKGKKDKDAPAKTEGDKTEPAKDDTASS
>Mature_146_residues
MFVTPAYAQAAAAAGGDANSMIMSLLPFALIFVIMYFLILRPQQKKVKEHAEMVKNIRRGDTIITSGGLVGKVTKVIDDD
TVEFELADGIRARQMRQMITGVRAKGEPVKDAPEANGKAKGKKDKDAPAKTEGDKTEPAKDDTASS

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=106, Percent_Identity=41.5094339622642, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 15723; Mature: 15723

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVTPAYAQAAAAAGGDANSMIMSLLPFALIFVIMYFLILRPQQKKVKEHAEMVKNIRRG
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
DTIITSGGLVGKVTKVIDDDTVEFELADGIRARQMRQMITGVRAKGEPVKDAPEANGKAK
CEEEECCCHHHHHHHHHCCCCEEEEHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GKKDKDAPAKTEGDKTEPAKDDTASS
CCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFVTPAYAQAAAAAGGDANSMIMSLLPFALIFVIMYFLILRPQQKKVKEHAEMVKNIRRG
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
DTIITSGGLVGKVTKVIDDDTVEFELADGIRARQMRQMITGVRAKGEPVKDAPEANGKAK
CEEEECCCHHHHHHHHHCCCCEEEEHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GKKDKDAPAKTEGDKTEPAKDDTASS
CCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]