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The map label for this gene is 192291515

Identifier: 192291515

GI number: 192291515

Start: 3387475

End: 3387972

Strand: Reverse

Name: 192291515

Synonym: Rpal_3141

Alternate gene names: NA

Gene position: 3387972-3387475 (Counterclockwise)

Preceding gene: 192291517

Following gene: 192291512

Centisome position: 58.98

GC content: 70.48

Gene sequence:

>498_bases
ATGGCAAGACGATCCATTCTGGTCGGAGCCGCGATCCTGGCGATGACCTCCGGCGCAGCCTCGGCGCTGGAGATCGACAC
GCTGGCGATCGAGAGCGGCAAGCTGGTGATCACCGGCAAGACCACCAAGGCCGGCCAGGAGGTCGAGGTCGTCGGCACCG
GCGACAAGGCCAAGAGCTCATCATCGCGCCGTTTCAAATTCTCGCTGTCGGACGTCCCCGAGACCTGCAAGCTCGACCTG
AAGTCGGGCACCGAAACCCTGACCGGCCTGCTCGTCGCCAATTGCGGGCCGCGTGGTCCGAAGGGTGAAGCGGGCGCTGC
AGGCGCCCCTGGCCCGGCCGGCCCCGCTGGTCCTGCAGGCCCGGCCGGTCCCGCCGGTCCGAAGGGTGATGCTGGTCCTG
CCGGTCCCGCGGGCCCTGCCGGCCCGGCTGGTCCCTCAGGCGCCACCGGCCCCGCCGGCCCGAAGGGTGAATCTGGCGAA
GCCGCGCCGAAGAACTGA

Upstream 100 bases:

>100_bases
CGCCATTCATTCGGCTATCCTCGGTTGTGGCGACCGCGGGCGGCCGCCTTGGCGATGGACACGACGCGCAAGCGTCACTG
CAACAGGTGGGGAGAAGTTG

Downstream 100 bases:

>100_bases
CCGAACGCTGATACGATCCGGCCCGCGGCATCGCGCCGCGCGGCCGCGATCGTGCGAGGCTACGCCAACGTTTGACATCG
AGTCAGGCGCGCGCCAGTGT

Product: Collagen triple helix repeat

Products: NA

Alternate protein names: Collagen Triple Helix Repeat

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MARRSILVGAAILAMTSGAASALEIDTLAIESGKLVITGKTTKAGQEVEVVGTGDKAKSSSSRRFKFSLSDVPETCKLDL
KSGTETLTGLLVANCGPRGPKGEAGAAGAPGPAGPAGPAGPAGPAGPKGDAGPAGPAGPAGPAGPSGATGPAGPKGESGE
AAPKN

Sequences:

>Translated_165_residues
MARRSILVGAAILAMTSGAASALEIDTLAIESGKLVITGKTTKAGQEVEVVGTGDKAKSSSSRRFKFSLSDVPETCKLDL
KSGTETLTGLLVANCGPRGPKGEAGAAGAPGPAGPAGPAGPAGPAGPKGDAGPAGPAGPAGPAGPSGATGPAGPKGESGE
AAPKN
>Mature_164_residues
ARRSILVGAAILAMTSGAASALEIDTLAIESGKLVITGKTTKAGQEVEVVGTGDKAKSSSSRRFKFSLSDVPETCKLDLK
SGTETLTGLLVANCGPRGPKGEAGAAGAPGPAGPAGPAGPAGPAGPKGDAGPAGPAGPAGPAGPSGATGPAGPKGESGEA
APKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15521; Mature: 15389

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRSILVGAAILAMTSGAASALEIDTLAIESGKLVITGKTTKAGQEVEVVGTGDKAKSS
CCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCC
SSRRFKFSLSDVPETCKLDLKSGTETLTGLLVANCGPRGPKGEAGAAGAPGPAGPAGPAG
CCCEEEEECCCCCCEEEEECCCCCHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PAGPAGPKGDAGPAGPAGPAGPAGPSGATGPAGPKGESGEAAPKN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARRSILVGAAILAMTSGAASALEIDTLAIESGKLVITGKTTKAGQEVEVVGTGDKAKSS
CCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCC
SSRRFKFSLSDVPETCKLDLKSGTETLTGLLVANCGPRGPKGEAGAAGAPGPAGPAGPAG
CCCEEEEECCCCCCEEEEECCCCCHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PAGPAGPKGDAGPAGPAGPAGPAGPSGATGPAGPKGESGEAAPKN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA