Click here to switch to the map view.

The map label for this gene is 192291404

Identifier: 192291404

GI number: 192291404

Start: 3289212

End: 3289610

Strand: Reverse

Name: 192291404

Synonym: Rpal_3028

Alternate gene names: NA

Gene position: 3289610-3289212 (Counterclockwise)

Preceding gene: 192291405

Following gene: 192291403

Centisome position: 57.27

GC content: 64.16

Gene sequence:

>399_bases
ATGACAGACACAGCCCGCAGCGTCCGCGAGTGGATCGGCAAGACGCCAGATAGTCGGCCGCCGCCCCACGTCCGCGTACG
GATATTCACAAAGCACGGCGGCCGGTGCCACTGGTCAGGCATCCTGATCCGCCCCGGCGATGCTTGGGACGTCGATCACG
TCATTGCGCTGATCAACGGCGGCGAGAACCGCGAAAGCAATATGGCGCCGATCCTGCGCGGCAAGCCGCACAAGGAAAAG
ACCCGCCAGGACGTCGCCGAGAAATCGCGCGTGTACCGGAAGCGCAAGGCGCATCTTGGGCTCAGCAAGCCGCGCCAGAA
GATCAAAAGCCGCGGCTTCGAGCCGGCCGCCCCGCAGCGCAGGGCAACGGCAGAAATCAGCAAATGGAGGGGATTCTAA

Upstream 100 bases:

>100_bases
AGGAGCAGCGAAAGTATCTGGCGCAGTTCTGCCCCCCGAAGGGATCGAAGCGCTTCCCTCGCCTGCCCCTCGAAATCATG
CTGGACGAGGCCGCACAGCA

Downstream 100 bases:

>100_bases
GATGGGTGGATCTCAGCAACGGCGCCAACCGGTCGCCGATCGTATCGAGGTCGATCCGATCGCGTGGATCTGTTGGGATC
TGGCATTCGGTAACGGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MTDTARSVREWIGKTPDSRPPPHVRVRIFTKHGGRCHWSGILIRPGDAWDVDHVIALINGGENRESNMAPILRGKPHKEK
TRQDVAEKSRVYRKRKAHLGLSKPRQKIKSRGFEPAAPQRRATAEISKWRGF

Sequences:

>Translated_132_residues
MTDTARSVREWIGKTPDSRPPPHVRVRIFTKHGGRCHWSGILIRPGDAWDVDHVIALINGGENRESNMAPILRGKPHKEK
TRQDVAEKSRVYRKRKAHLGLSKPRQKIKSRGFEPAAPQRRATAEISKWRGF
>Mature_131_residues
TDTARSVREWIGKTPDSRPPPHVRVRIFTKHGGRCHWSGILIRPGDAWDVDHVIALINGGENRESNMAPILRGKPHKEKT
RQDVAEKSRVYRKRKAHLGLSKPRQKIKSRGFEPAAPQRRATAEISKWRGF

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15118; Mature: 14986

Theoretical pI: Translated: 11.82; Mature: 11.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTARSVREWIGKTPDSRPPPHVRVRIFTKHGGRCHWSGILIRPGDAWDVDHVIALING
CCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEECEEEECCCCCCCCCCEEEEEEC
GENRESNMAPILRGKPHKEKTRQDVAEKSRVYRKRKAHLGLSKPRQKIKSRGFEPAAPQR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCH
RATAEISKWRGF
HHHHHHHHHCCC
>Mature Secondary Structure 
TDTARSVREWIGKTPDSRPPPHVRVRIFTKHGGRCHWSGILIRPGDAWDVDHVIALING
CCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEECEEEECCCCCCCCCCEEEEEEC
GENRESNMAPILRGKPHKEKTRQDVAEKSRVYRKRKAHLGLSKPRQKIKSRGFEPAAPQR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCH
RATAEISKWRGF
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA