| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291400
Identifier: 192291400
GI number: 192291400
Start: 3287325
End: 3287492
Strand: Reverse
Name: 192291400
Synonym: Rpal_3024
Alternate gene names: NA
Gene position: 3287492-3287325 (Counterclockwise)
Preceding gene: 192291401
Following gene: 192291399
Centisome position: 57.23
GC content: 60.71
Gene sequence:
>168_bases ATGAGTCGTACGCTCACCGAAGAATTAGCTTTGGAGCAGGAGCTACTACGCCGCCGGGTGATCCATGCGACGCGCCCGCG CGGCGCTATGAACCTCTCGGAGGAGATCGAGTTTTGCCGGCGGATGGAAGCCTCTCCGGTGCCCGATGAGCAGGAGCAGA AATCGTGA
Upstream 100 bases:
>100_bases CGCAGCGCATCATAGACGCCTATTTGGCCCGCCGCGGCGTGCTGGCGGCGAACGCCATCGCGAAGCTGGAAGACTACCGG GACCGTCAGGGGAAGCAGCC
Downstream 100 bases:
>100_bases TCACGGACGAACGCGCGATCGAGATCGCCGAACAGCACGCCAAGCGGCATGGCCGTCCGATTGTGAACATCCCGCCGAAC GGCGCCGTTGATGAGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MSRTLTEELALEQELLRRRVIHATRPRGAMNLSEEIEFCRRMEASPVPDEQEQKS
Sequences:
>Translated_55_residues MSRTLTEELALEQELLRRRVIHATRPRGAMNLSEEIEFCRRMEASPVPDEQEQKS >Mature_54_residues SRTLTEELALEQELLRRRVIHATRPRGAMNLSEEIEFCRRMEASPVPDEQEQKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6469; Mature: 6338
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTLTEELALEQELLRRRVIHATRPRGAMNLSEEIEFCRRMEASPVPDEQEQKS CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SRTLTEELALEQELLRRRVIHATRPRGAMNLSEEIEFCRRMEASPVPDEQEQKS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA