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The map label for this gene is 192291392

Identifier: 192291392

GI number: 192291392

Start: 3281428

End: 3281913

Strand: Reverse

Name: 192291392

Synonym: Rpal_3016

Alternate gene names: NA

Gene position: 3281913-3281428 (Counterclockwise)

Preceding gene: 192291399

Following gene: 192291379

Centisome position: 57.14

GC content: 63.99

Gene sequence:

>486_bases
ATGAGTATTTCGATCGACCGACGCGGGCGCGCCAACGCGCTGCGAAGCCGTTTTTCGCTGCCGCGCAGCTTCGGCCTGGC
CGTGGCGCTGACGCTGGTCGGCGCCGGCATGGGTGGCTGCACGTCAGAGCAATTCCAGAAGGGCTACATTCTGCCCAATG
GCGCGCTGGAGCAGATTCCGATCGGCGCCAGCCAGGATCAGGTGCTGCTGGTGATGGGTACGCCGTCGACGGTGGCGACG
CTGGACGGCGAGGTGTTCTACTACATCTCCCAGCGCACCGAGCGTGCGGTCGCGTTCATGCCGCAGAAGGTGATCGACCA
GCGGGTGATCGCGATCTATTTCGACAAGAACCGCCAGGTCCGCCGCATCGCCAATTACGGCCTGCAGGACGGCAAGATCT
TCGACTTCATCAGCCGCACCACGCCGACCTCCGGCCAGGAGATGAGCTATCTGGCGCCGCTGTTCCGGCTGATCAGCTTC
CGCTAA

Upstream 100 bases:

>100_bases
CCAGGTCCGGGCCCGTGCGGGCCTTTCGGGATTGCTTTCCGAGTTCCTGCCCGGTACGTCAACGCCCTGCGCGATGCAAG
GGGATGAGGCCAACTCCCGG

Downstream 100 bases:

>100_bases
GGCGAGGCTGCCGCATGATGAGCTGATGGGTTGAGCCGAAGGCAAAACCCATCAGAGACACCGGAGCCGGCTACGCCAGC
CCCTTCCCCTTCGCCCATTC

Product: SmpA/OmlA domain-containing protein

Products: NA

Alternate protein names: SmpA/OmlA; SmpA/OmlA Domain Protein; Small Protein A; Outer Membrane Protein; Lipoprotein SmpA/OmlA Family; SmpA/OmlA Family Outer Membrane Protein; SmAll Protein A; SmpA/OmlA Family Lipoprotein; SmpA / OmlA Family; SmpA Protein

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSISIDRRGRANALRSRFSLPRSFGLAVALTLVGAGMGGCTSEQFQKGYILPNGALEQIPIGASQDQVLLVMGTPSTVAT
LDGEVFYYISQRTERAVAFMPQKVIDQRVIAIYFDKNRQVRRIANYGLQDGKIFDFISRTTPTSGQEMSYLAPLFRLISF
R

Sequences:

>Translated_161_residues
MSISIDRRGRANALRSRFSLPRSFGLAVALTLVGAGMGGCTSEQFQKGYILPNGALEQIPIGASQDQVLLVMGTPSTVAT
LDGEVFYYISQRTERAVAFMPQKVIDQRVIAIYFDKNRQVRRIANYGLQDGKIFDFISRTTPTSGQEMSYLAPLFRLISF
R
>Mature_160_residues
SISIDRRGRANALRSRFSLPRSFGLAVALTLVGAGMGGCTSEQFQKGYILPNGALEQIPIGASQDQVLLVMGTPSTVATL
DGEVFYYISQRTERAVAFMPQKVIDQRVIAIYFDKNRQVRRIANYGLQDGKIFDFISRTTPTSGQEMSYLAPLFRLISFR

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17892; Mature: 17761

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISIDRRGRANALRSRFSLPRSFGLAVALTLVGAGMGGCTSEQFQKGYILPNGALEQIP
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHCC
IGASQDQVLLVMGTPSTVATLDGEVFYYISQRTERAVAFMPQKVIDQRVIAIYFDKNRQV
CCCCCCCEEEEEECCCEEEEECCEEEEEEECCCHHHHHHCCHHHHCCEEEEEEECCCCHH
RRIANYGLQDGKIFDFISRTTPTSGQEMSYLAPLFRLISFR
HHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SISIDRRGRANALRSRFSLPRSFGLAVALTLVGAGMGGCTSEQFQKGYILPNGALEQIP
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHCC
IGASQDQVLLVMGTPSTVATLDGEVFYYISQRTERAVAFMPQKVIDQRVIAIYFDKNRQV
CCCCCCCEEEEEECCCEEEEECCEEEEEEECCCHHHHHHCCHHHHCCEEEEEEECCCCHH
RRIANYGLQDGKIFDFISRTTPTSGQEMSYLAPLFRLISFR
HHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA