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The map label for this gene is 192291343

Identifier: 192291343

GI number: 192291343

Start: 3235839

End: 3236513

Strand: Reverse

Name: 192291343

Synonym: Rpal_2965

Alternate gene names: NA

Gene position: 3236513-3235839 (Counterclockwise)

Preceding gene: 192291344

Following gene: 192291336

Centisome position: 56.35

GC content: 68.74

Gene sequence:

>675_bases
ATGCCGACGTTGACGCGGGGCTCCGGGCCCCGCGTCCCGACCTCCCTTACCGACCCTGACCGCGACTGCCCGTTGTGCCC
ACGACTCGCTGAATTCCGCAGCGAGGCCCGCGCGCGCGAACCGGGCTGGTTCAACGCGCCCGTCCCGTCGTTCGGCGGCG
CCGACGCCTCGCTGCTGATTGTCGGCCTTGCGCCGGGCCTACAGGGCGCCAACCGCACCGGCCGGCCGTTCACCGGCGAC
TACGCCGGCGACCTGCTCTACGCCACGCTGATCGACTACGGCTTCGCCCGAGGTCACTATCAGGCCCGGCCCGACGATGG
GCTGCAGCTGACCGACTGCCGGATCAGCAACGCGGTGCGTTGCGTGCCGCCGCAGAACAAGCCGCTGCCGATCGAAATCA
ACACCTGCCGCCGCTTTCTGATCGCCACGATCGAAGCGATGCCGAAGCTGCGTGCGATCGTCCTGCTCGGGCGGATCGCT
CACGATTCAACGCTGAAGGCGCTCGGCCTCCGTGCCGCCCAGGCCCCGTTCGGCCATGGCGCCGTGCACGATGCCGGCCG
ACTGCGCCTCTACGACAGCTACCACTGCTCGCGCTACAACACGAACACCGGCGTGCTGACGCCGAAGATGTTCCGCGATG
TGTTCGCGCGGGTGCGGACTGACCTCGATACTTAA

Upstream 100 bases:

>100_bases
GCGAGCCCCGCGAACCGCGTCACCACGCGCCGCAATTCCTGCAGCGGCCCACTGCCTTGGCGTCGCGCGCCGGGGCTGAC
GACTTCGAAGACTAAGGTCC

Downstream 100 bases:

>100_bases
GCTGTAACAGCTGAGCCTTCGTCATTGCGAACGAAGCGAAGCAATCCAGGCCATACGTAAAGCATGGATTGCTTCGTCGC
GACGCTCGTCGCCATGACAA

Product: uracil-DNA glycosylase superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MPTLTRGSGPRVPTSLTDPDRDCPLCPRLAEFRSEARAREPGWFNAPVPSFGGADASLLIVGLAPGLQGANRTGRPFTGD
YAGDLLYATLIDYGFARGHYQARPDDGLQLTDCRISNAVRCVPPQNKPLPIEINTCRRFLIATIEAMPKLRAIVLLGRIA
HDSTLKALGLRAAQAPFGHGAVHDAGRLRLYDSYHCSRYNTNTGVLTPKMFRDVFARVRTDLDT

Sequences:

>Translated_224_residues
MPTLTRGSGPRVPTSLTDPDRDCPLCPRLAEFRSEARAREPGWFNAPVPSFGGADASLLIVGLAPGLQGANRTGRPFTGD
YAGDLLYATLIDYGFARGHYQARPDDGLQLTDCRISNAVRCVPPQNKPLPIEINTCRRFLIATIEAMPKLRAIVLLGRIA
HDSTLKALGLRAAQAPFGHGAVHDAGRLRLYDSYHCSRYNTNTGVLTPKMFRDVFARVRTDLDT
>Mature_223_residues
PTLTRGSGPRVPTSLTDPDRDCPLCPRLAEFRSEARAREPGWFNAPVPSFGGADASLLIVGLAPGLQGANRTGRPFTGDY
AGDLLYATLIDYGFARGHYQARPDDGLQLTDCRISNAVRCVPPQNKPLPIEINTCRRFLIATIEAMPKLRAIVLLGRIAH
DSTLKALGLRAAQAPFGHGAVHDAGRLRLYDSYHCSRYNTNTGVLTPKMFRDVFARVRTDLDT

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1105 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 24489; Mature: 24358

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLTRGSGPRVPTSLTDPDRDCPLCPRLAEFRSEARAREPGWFNAPVPSFGGADASLLI
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE
VGLAPGLQGANRTGRPFTGDYAGDLLYATLIDYGFARGHYQARPDDGLQLTDCRISNAVR
EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEE
CVPPQNKPLPIEINTCRRFLIATIEAMPKLRAIVLLGRIAHDSTLKALGLRAAQAPFGHG
ECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
AVHDAGRLRLYDSYHCSRYNTNTGVLTPKMFRDVFARVRTDLDT
CCCCCCCEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PTLTRGSGPRVPTSLTDPDRDCPLCPRLAEFRSEARAREPGWFNAPVPSFGGADASLLI
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE
VGLAPGLQGANRTGRPFTGDYAGDLLYATLIDYGFARGHYQARPDDGLQLTDCRISNAVR
EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEE
CVPPQNKPLPIEINTCRRFLIATIEAMPKLRAIVLLGRIAHDSTLKALGLRAAQAPFGHG
ECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
AVHDAGRLRLYDSYHCSRYNTNTGVLTPKMFRDVFARVRTDLDT
CCCCCCCEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]