Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192291307

Identifier: 192291307

GI number: 192291307

Start: 3195984

End: 3196562

Strand: Reverse

Name: 192291307

Synonym: Rpal_2929

Alternate gene names: NA

Gene position: 3196562-3195984 (Counterclockwise)

Preceding gene: 192291309

Following gene: 192291306

Centisome position: 55.65

GC content: 67.36

Gene sequence:

>579_bases
ATGCGACGAGTATTCCTTGAGTTCCAGAACGCGATGCTGCGTTGCCTGGCCGTGAGCGGTCTTGCTCTGTCGATCGGCGT
CGGCGGCGCCATCGCCCAGAGCGGCGATCTGCGCGCTCAGGATCAGACGCAGAAGCCGCCCGCAGCCGCCAACAATCAGC
CGGCTCAGTCGACTGCCGACGCGCTCAAGGAAAGCCAGAAGAAGACCGACGAATTCGCCGAGGCTGCGCAGGCGATCAAC
GGCCCCGCCGGCAACCCGGAATGCGTCTGGCTCGGCCGCCGCGTCGTGGTTCTGATGTGGCGCGACGATCTCGACACCGC
GTTCCGCCACCTCGATATGTATGACCGCTTCGGCTGCCCGACGGGTCACATTCAGGCGGCATTCAGGTGTGTCGTGCGAT
CTGGTCCTATCGACCCGAAAGCCCCCGACAGCCTCAGCGGACGCGTGCACGCATGCTGGATCAATCCGACCGCCCAGCAG
CAGCCCGCCGCAGCGGCCGCAACGCCTCCCGGTCCGGCCGCGAAGCCGGCGCAAGCGCCTGCCCCGCAGCAACCGGCGGC
TCCCGCGCCTGCGAAATAA

Upstream 100 bases:

>100_bases
GGGATTCTGCCGAGGGCCACGCCCTATCGGCGACGAATTCAAGCGGCATCAGGTGGATCGACCGGCGCCGCGATGGCCCG
GCAACGAGATCGGGGACACG

Downstream 100 bases:

>100_bases
CTCCGCGGCGCGCTGGAACGGTCGGGATTTTCTCGGGTTTGGTCGCCGGACGCCCTCAATTCGCCACGGGGTCGGCCGAG
TTGCTTGGACACGGGGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MRRVFLEFQNAMLRCLAVSGLALSIGVGGAIAQSGDLRAQDQTQKPPAAANNQPAQSTADALKESQKKTDEFAEAAQAIN
GPAGNPECVWLGRRVVVLMWRDDLDTAFRHLDMYDRFGCPTGHIQAAFRCVVRSGPIDPKAPDSLSGRVHACWINPTAQQ
QPAAAAATPPGPAAKPAQAPAPQQPAAPAPAK

Sequences:

>Translated_192_residues
MRRVFLEFQNAMLRCLAVSGLALSIGVGGAIAQSGDLRAQDQTQKPPAAANNQPAQSTADALKESQKKTDEFAEAAQAIN
GPAGNPECVWLGRRVVVLMWRDDLDTAFRHLDMYDRFGCPTGHIQAAFRCVVRSGPIDPKAPDSLSGRVHACWINPTAQQ
QPAAAAATPPGPAAKPAQAPAPQQPAAPAPAK
>Mature_192_residues
MRRVFLEFQNAMLRCLAVSGLALSIGVGGAIAQSGDLRAQDQTQKPPAAANNQPAQSTADALKESQKKTDEFAEAAQAIN
GPAGNPECVWLGRRVVVLMWRDDLDTAFRHLDMYDRFGCPTGHIQAAFRCVVRSGPIDPKAPDSLSGRVHACWINPTAQQ
QPAAAAATPPGPAAKPAQAPAPQQPAAPAPAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20239; Mature: 20239

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVFLEFQNAMLRCLAVSGLALSIGVGGAIAQSGDLRAQDQTQKPPAAANNQPAQSTAD
CCHHHHHHHHHHHHHHHHCCEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ALKESQKKTDEFAEAAQAINGPAGNPECVWLGRRVVVLMWRDDLDTAFRHLDMYDRFGCP
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHCCCC
TGHIQAAFRCVVRSGPIDPKAPDSLSGRVHACWINPTAQQQPAAAAATPPGPAAKPAQAP
CHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
APQQPAAPAPAK
CCCCCCCCCCCC
>Mature Secondary Structure
MRRVFLEFQNAMLRCLAVSGLALSIGVGGAIAQSGDLRAQDQTQKPPAAANNQPAQSTAD
CCHHHHHHHHHHHHHHHHCCEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ALKESQKKTDEFAEAAQAINGPAGNPECVWLGRRVVVLMWRDDLDTAFRHLDMYDRFGCP
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHCCCC
TGHIQAAFRCVVRSGPIDPKAPDSLSGRVHACWINPTAQQQPAAAAATPPGPAAKPAQAP
CHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
APQQPAAPAPAK
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA