| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291289
Identifier: 192291289
GI number: 192291289
Start: 3177599
End: 3178084
Strand: Reverse
Name: 192291289
Synonym: Rpal_2911
Alternate gene names: NA
Gene position: 3178084-3177599 (Counterclockwise)
Preceding gene: 192291290
Following gene: 192291275
Centisome position: 55.33
GC content: 63.79
Gene sequence:
>486_bases ATGAGTGCGGACCAGGAACTCGGCATCCTTGCTCGCCGGCGCATCGAGGCCGGTGTCATCAAGCCGATCTACGAGACGCT GTGTGCGCATCTCGGCAAGGAGCGGGCTCAATCGCTGATCGGCGAGGCCATTGCCAAGACCGCGGTCGAGGCCGGCCGCG ACTTTGCGGCCCGCGTGCCGGGCGGAGCGGACATCCGCAGCTTCGCTGAGCTGCAAAAATTGTGGACCCAGGACGACGCG CTGGAGGTCGAGGTTCTGCGCGCGGACGACGGCGGCTTTAGCTACGACGTGCATCGTTGCCGCTATGCCGAGATGTATCG CGAGATGGGGCTGGCGGAGATCGGACACCTGCTCTCCTGCAACCGCGACCACGGCTTCATCGAAGGCTATGATCCCCGTG TCGAGCTGACCCGCACGCGTACCTTGATGTCGGGCGGCGCGTGTTGCGATTTCCGATACGAAGTCAAAGCCGTCGCAAAG ACGTAA
Upstream 100 bases:
>100_bases AGTTGCTGATCAAGAAAAGCGGCGTGTTCGGCGCGGTCGCCGAGAGTCCGGCTCTGCTCGAGGCGCTGAAGCGACTGCCA GTCGCGGAGGTGGCTTCTTC
Downstream 100 bases:
>100_bases TCGGCCGGCGCGGCCGAAGAGGTTCTTCCGCGCCTCGCAGCGCCTCGTCAGCCGATCTCCTTGGCGTCCCGGTGCCGGTA CAGCACCATCATCAGCGGCG
Product: L-2-amino-thiazoline-4-carboxylic acid hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSADQELGILARRRIEAGVIKPIYETLCAHLGKERAQSLIGEAIAKTAVEAGRDFAARVPGGADIRSFAELQKLWTQDDA LEVEVLRADDGGFSYDVHRCRYAEMYREMGLAEIGHLLSCNRDHGFIEGYDPRVELTRTRTLMSGGACCDFRYEVKAVAK T
Sequences:
>Translated_161_residues MSADQELGILARRRIEAGVIKPIYETLCAHLGKERAQSLIGEAIAKTAVEAGRDFAARVPGGADIRSFAELQKLWTQDDA LEVEVLRADDGGFSYDVHRCRYAEMYREMGLAEIGHLLSCNRDHGFIEGYDPRVELTRTRTLMSGGACCDFRYEVKAVAK T >Mature_160_residues SADQELGILARRRIEAGVIKPIYETLCAHLGKERAQSLIGEAIAKTAVEAGRDFAARVPGGADIRSFAELQKLWTQDDAL EVEVLRADDGGFSYDVHRCRYAEMYREMGLAEIGHLLSCNRDHGFIEGYDPRVELTRTRTLMSGGACCDFRYEVKAVAKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17900; Mature: 17768
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADQELGILARRRIEAGVIKPIYETLCAHLGKERAQSLIGEAIAKTAVEAGRDFAARVP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCC GGADIRSFAELQKLWTQDDALEVEVLRADDGGFSYDVHRCRYAEMYREMGLAEIGHLLSC CCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHC NRDHGFIEGYDPRVELTRTRTLMSGGACCDFRYEVKAVAKT CCCCCCCCCCCCCEEHHHHHHHHCCCCEECCHHHHEEECCC >Mature Secondary Structure SADQELGILARRRIEAGVIKPIYETLCAHLGKERAQSLIGEAIAKTAVEAGRDFAARVP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCC GGADIRSFAELQKLWTQDDALEVEVLRADDGGFSYDVHRCRYAEMYREMGLAEIGHLLSC CCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHC NRDHGFIEGYDPRVELTRTRTLMSGGACCDFRYEVKAVAKT CCCCCCCCCCCCCEEHHHHHHHHCCCCEECCHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA