| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291248
Identifier: 192291248
GI number: 192291248
Start: 3133784
End: 3134041
Strand: Reverse
Name: 192291248
Synonym: Rpal_2870
Alternate gene names: NA
Gene position: 3134041-3133784 (Counterclockwise)
Preceding gene: 192291255
Following gene: 192291238
Centisome position: 54.56
GC content: 64.34
Gene sequence:
>258_bases ATGTTCAAGGCTCTTTCCGTGATCGCGATTGCCGCCTTTGCTGCCGCGGCGGTCACCATTCTTCCGGGCTTTGCCCCGCA GGTGGAGGCCAGCGTCCCACAGGCTCTGGCCAAGGGTGACCGGCTCGACATCCGTCCCCTCGGCACCTCCTGCTCCGAGC AGGCTTGGCCGAATTTCGAACCGTCGTGCCTTCGTAACGCAAATGCCAGCCACGCGCCGATCGGCCAGGCGCGGCTGGTG ACTGCGGAACGACATTAA
Upstream 100 bases:
>100_bases GACGTTCTGAAACCAGCGCTGGGTAAACCGGCCTCATCGGGAAGCGACAAAGCACTCCAGGCCGAAACGGCCGGACATTG AGACGACAGGGGACTCCGTC
Downstream 100 bases:
>100_bases GGTTTTGGCGTTATCCCACCGCTAGTTTCCGCAAAGCGCTTCCCTCCAAGGGCGCTCTGTACCGAAGACCCCCGAGTTGC CCCCTCGGGGGTCTTTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MFKALSVIAIAAFAAAAVTILPGFAPQVEASVPQALAKGDRLDIRPLGTSCSEQAWPNFEPSCLRNANASHAPIGQARLV TAERH
Sequences:
>Translated_85_residues MFKALSVIAIAAFAAAAVTILPGFAPQVEASVPQALAKGDRLDIRPLGTSCSEQAWPNFEPSCLRNANASHAPIGQARLV TAERH >Mature_85_residues MFKALSVIAIAAFAAAAVTILPGFAPQVEASVPQALAKGDRLDIRPLGTSCSEQAWPNFEPSCLRNANASHAPIGQARLV TAERH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8910; Mature: 8910
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKALSVIAIAAFAAAAVTILPGFAPQVEASVPQALAKGDRLDIRPLGTSCSEQAWPNFE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCC PSCLRNANASHAPIGQARLVTAERH HHHHCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MFKALSVIAIAAFAAAAVTILPGFAPQVEASVPQALAKGDRLDIRPLGTSCSEQAWPNFE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCC PSCLRNANASHAPIGQARLVTAERH HHHHCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA