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The map label for this gene is yiaO [C]

Identifier: 192291192

GI number: 192291192

Start: 3057969

End: 3058988

Strand: Reverse

Name: yiaO [C]

Synonym: Rpal_2813

Alternate gene names: 192291192

Gene position: 3058988-3057969 (Counterclockwise)

Preceding gene: 192291196

Following gene: 192291191

Centisome position: 53.25

GC content: 65.49

Gene sequence:

>1020_bases
ATGCTGTCACGCCGCCACCTCCTCGTCTCCGCACTGGCAGCGCCCGCGGTCCTGAAATACGGGATCGGCTCAGCGCAGGC
GGCAACGACGCTGAAGATCTCGCATCAGTTTCCCGGCGGCACCATCGACAAAGGCGACTTCCGCGACCGGCTGTGCCGCA
AGTTCGCCGACGAAATCAGCAAGCGCTCCGGCGGCGAACTGGTCGGCGAAGTCTATCCGGGCTCATCGCTGATCAAGACC
AACGCGCAGTTCTCGGCGATGCGCAAAGGCGCGCTCGATCTGTCGCTGTATCCGATGCCCTATGCGGGCGGCGAAGTCCC
GGAGACCAATATCGGCCTGATGCCGGGACTGGTCTCGACCTATGAGCAGGGCCTGTCGTGGAAGACCAAGCCGGTCGGCA
AGGCGCTGACCGACTTCCTCGCCGACAAGGGCATCGTGCTGGTCACCTGGGTGTGGCAGGCCGGCGGCGTCGCCAGCCGT
TCCAAGGCGCTGCTGTCACCTGACGACGCCAAGGGCCTCAAGGTCCGCGGCGGCTCGCGCGAGATGGACATGGTGCTGCA
GCAGGCCGGCGCCGCGGTGCTGTCGGTACCGTCCAACGAGATCTATGCCGCGATGCAGACCGGCGCCTGCGACGCCGGCA
TCACCTCCTCCACCAGCCTGATCTCGTTCCGGCTCGAGGAAGTCGCCAAGCACCTCACCTCCGGCGCGGACGCCTCGTAC
TGGTTCATGCTCGAGCCGCTGATGATGTCGAAGGCGATCTTCGACAAGCTGCCGAAGAACCATCAGGACATCATTCTGTC
GGTCGGTGCCGAGCTCGAAACGTTCGGCAAGCAAGGCGCCCAGGCCGACGATATCGAGGTCGCCAAGGTGTACGAGAAGG
CCGGCGCCAAGGTCGACAAGCTCGACGCCGCCACGGTCGAGAAGTGGGCCGTGATCGCCCGCGACACCGCGTGGAAGGAC
TACGGCAAGAAGACCGCGACCTGCGCCAACCTGCTCAAGCTCGCGACCGACGCGGCATGA

Upstream 100 bases:

>100_bases
ACCTCGTCGCAATCCGTCCGATCGCCGCCTCTCGCCTTGACCGCTCAGCGACCAATGCTTTAGCGATTCAGGACAACAGA
AAATGATCGGGAGAGAAACG

Downstream 100 bases:

>100_bases
TGCACGGCCCCGTGCCCGGCCAGCCGGACCCGACCAGCGCCGCGCAGCGCGAGACCGGCGGCCCGCTCGGCCACGCGCTG
GCGCTGGTCAACCGAGCCAT

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MLSRRHLLVSALAAPAVLKYGIGSAQAATTLKISHQFPGGTIDKGDFRDRLCRKFADEISKRSGGELVGEVYPGSSLIKT
NAQFSAMRKGALDLSLYPMPYAGGEVPETNIGLMPGLVSTYEQGLSWKTKPVGKALTDFLADKGIVLVTWVWQAGGVASR
SKALLSPDDAKGLKVRGGSREMDMVLQQAGAAVLSVPSNEIYAAMQTGACDAGITSSTSLISFRLEEVAKHLTSGADASY
WFMLEPLMMSKAIFDKLPKNHQDIILSVGAELETFGKQGAQADDIEVAKVYEKAGAKVDKLDAATVEKWAVIARDTAWKD
YGKKTATCANLLKLATDAA

Sequences:

>Translated_339_residues
MLSRRHLLVSALAAPAVLKYGIGSAQAATTLKISHQFPGGTIDKGDFRDRLCRKFADEISKRSGGELVGEVYPGSSLIKT
NAQFSAMRKGALDLSLYPMPYAGGEVPETNIGLMPGLVSTYEQGLSWKTKPVGKALTDFLADKGIVLVTWVWQAGGVASR
SKALLSPDDAKGLKVRGGSREMDMVLQQAGAAVLSVPSNEIYAAMQTGACDAGITSSTSLISFRLEEVAKHLTSGADASY
WFMLEPLMMSKAIFDKLPKNHQDIILSVGAELETFGKQGAQADDIEVAKVYEKAGAKVDKLDAATVEKWAVIARDTAWKD
YGKKTATCANLLKLATDAA
>Mature_339_residues
MLSRRHLLVSALAAPAVLKYGIGSAQAATTLKISHQFPGGTIDKGDFRDRLCRKFADEISKRSGGELVGEVYPGSSLIKT
NAQFSAMRKGALDLSLYPMPYAGGEVPETNIGLMPGLVSTYEQGLSWKTKPVGKALTDFLADKGIVLVTWVWQAGGVASR
SKALLSPDDAKGLKVRGGSREMDMVLQQAGAAVLSVPSNEIYAAMQTGACDAGITSSTSLISFRLEEVAKHLTSGADASY
WFMLEPLMMSKAIFDKLPKNHQDIILSVGAELETFGKQGAQADDIEVAKVYEKAGAKVDKLDAATVEKWAVIARDTAWKD
YGKKTATCANLLKLATDAA

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=295, Percent_Identity=25.0847457627119, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36181; Mature: 36181

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRRHLLVSALAAPAVLKYGIGSAQAATTLKISHQFPGGTIDKGDFRDRLCRKFADEIS
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
KRSGGELVGEVYPGSSLIKTNAQFSAMRKGALDLSLYPMPYAGGEVPETNIGLMPGLVST
HCCCCCEEEEECCCCCEEECCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHH
YEQGLSWKTKPVGKALTDFLADKGIVLVTWVWQAGGVASRSKALLSPDDAKGLKVRGGSR
HHHCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCH
EMDMVLQQAGAAVLSVPSNEIYAAMQTGACDAGITSSTSLISFRLEEVAKHLTSGADASY
HHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
WFMLEPLMMSKAIFDKLPKNHQDIILSVGAELETFGKQGAQADDIEVAKVYEKAGAKVDK
HEEHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCHH
LDAATVEKWAVIARDTAWKDYGKKTATCANLLKLATDAA
HHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSRRHLLVSALAAPAVLKYGIGSAQAATTLKISHQFPGGTIDKGDFRDRLCRKFADEIS
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
KRSGGELVGEVYPGSSLIKTNAQFSAMRKGALDLSLYPMPYAGGEVPETNIGLMPGLVST
HCCCCCEEEEECCCCCEEECCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHH
YEQGLSWKTKPVGKALTDFLADKGIVLVTWVWQAGGVASRSKALLSPDDAKGLKVRGGSR
HHHCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCH
EMDMVLQQAGAAVLSVPSNEIYAAMQTGACDAGITSSTSLISFRLEEVAKHLTSGADASY
HHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
WFMLEPLMMSKAIFDKLPKNHQDIILSVGAELETFGKQGAQADDIEVAKVYEKAGAKVDK
HEEHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCHH
LDAATVEKWAVIARDTAWKDYGKKTATCANLLKLATDAA
HHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]