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The map label for this gene is 192291191

Identifier: 192291191

GI number: 192291191

Start: 3057421

End: 3057972

Strand: Reverse

Name: 192291191

Synonym: Rpal_2812

Alternate gene names: NA

Gene position: 3057972-3057421 (Counterclockwise)

Preceding gene: 192291192

Following gene: 192291190

Centisome position: 53.24

GC content: 69.57

Gene sequence:

>552_bases
ATGATGCACGGCCCCGTGCCCGGCCAGCCGGACCCGACCAGCGCCGCGCAGCGCGAGACCGGCGGCCCGCTCGGCCACGC
GCTGGCGCTGGTCAACCGAGCCATCCTCGTCCTCGCCGCGGTCGCGCTGGTGGTCGCCTGCTGCATCCTCAGCTACAGCG
TGGCGGTACGCAGCCTGTTCCACAGCGCCACCTATTGGCAGGACGAGGCCGCGGTGTTCCTGCTGGTCGGCGCCACCTTC
CTGACCGCCGCCTTCGTGCAAAGCCAACGCGGCCATATCGGCATCGAGGCGTTCACCGGGCTGCTGCCGCCGGCCGTGAA
CCGCGTCCGGCTGCTGCTGGTCGACGTCGCCAGCCTCGCCTTCTGCGGCTTCTTCGCCTGGAAATCCTGGACGCTGACGC
ACGAGGCCTATGTCGACGGCCAGGTCTCGAATTCGATCTGGTCGCCGCCGCTCGCCATCCCCTACGCGCTGATGGCCGCC
GGCATGACGCTGCTGTGCCTGCAGATCGCGGTGCAGATCGTGAACTCCTTCAGTGGGACGAAGCGCGCGTGA

Upstream 100 bases:

>100_bases
TCGAGAAGTGGGCCGTGATCGCCCGCGACACCGCGTGGAAGGACTACGGCAAGAAGACCGCGACCTGCGCCAACCTGCTC
AAGCTCGCGACCGACGCGGC

Downstream 100 bases:

>100_bases
CAGTCCTCGGCATTGGGATCAGTTACGGCCTCGCCACGCTGGCGGCGATGTTCTCCGGCATGCCGATCGCATTTGCGCTC
GGCGCCGTCGCGCTGGTGTT

Product: Tripartite ATP-independent periplasmic transporter DctQ component

Products: NA

Alternate protein names: TRAP-Type C4-Dicarboxylate Transport System DctQ Subunit; TRAP Dicarboxylate Family Transporter DctQ Subunit; TRAP Transporter; TRAP Dicarboxylate Transporter DctM Subunit; C4-Dicarboxylate Transport; TRAP-Type C4-Dicarboxylate Transport System Small Permease

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MMHGPVPGQPDPTSAAQRETGGPLGHALALVNRAILVLAAVALVVACCILSYSVAVRSLFHSATYWQDEAAVFLLVGATF
LTAAFVQSQRGHIGIEAFTGLLPPAVNRVRLLLVDVASLAFCGFFAWKSWTLTHEAYVDGQVSNSIWSPPLAIPYALMAA
GMTLLCLQIAVQIVNSFSGTKRA

Sequences:

>Translated_183_residues
MMHGPVPGQPDPTSAAQRETGGPLGHALALVNRAILVLAAVALVVACCILSYSVAVRSLFHSATYWQDEAAVFLLVGATF
LTAAFVQSQRGHIGIEAFTGLLPPAVNRVRLLLVDVASLAFCGFFAWKSWTLTHEAYVDGQVSNSIWSPPLAIPYALMAA
GMTLLCLQIAVQIVNSFSGTKRA
>Mature_183_residues
MMHGPVPGQPDPTSAAQRETGGPLGHALALVNRAILVLAAVALVVACCILSYSVAVRSLFHSATYWQDEAAVFLLVGATF
LTAAFVQSQRGHIGIEAFTGLLPPAVNRVRLLLVDVASLAFCGFFAWKSWTLTHEAYVDGQVSNSIWSPPLAIPYALMAA
GMTLLCLQIAVQIVNSFSGTKRA

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19409; Mature: 19409

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHGPVPGQPDPTSAAQRETGGPLGHALALVNRAILVLAAVALVVACCILSYSVAVRSLF
CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSATYWQDEAAVFLLVGATFLTAAFVQSQRGHIGIEAFTGLLPPAVNRVRLLLVDVASLA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
FCGFFAWKSWTLTHEAYVDGQVSNSIWSPPLAIPYALMAAGMTLLCLQIAVQIVNSFSGT
HHHHHHHHCEEECHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KRA
CCC
>Mature Secondary Structure
MMHGPVPGQPDPTSAAQRETGGPLGHALALVNRAILVLAAVALVVACCILSYSVAVRSLF
CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSATYWQDEAAVFLLVGATFLTAAFVQSQRGHIGIEAFTGLLPPAVNRVRLLLVDVASLA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
FCGFFAWKSWTLTHEAYVDGQVSNSIWSPPLAIPYALMAAGMTLLCLQIAVQIVNSFSGT
HHHHHHHHCEEECHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KRA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA