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The map label for this gene is yjgH [H]

Identifier: 192291153

GI number: 192291153

Start: 3016707

End: 3017105

Strand: Reverse

Name: yjgH [H]

Synonym: Rpal_2774

Alternate gene names: 192291153

Gene position: 3017105-3016707 (Counterclockwise)

Preceding gene: 192291154

Following gene: 192291147

Centisome position: 52.53

GC content: 60.9

Gene sequence:

>399_bases
ATGTCGAAATCCGAGGTGATCTTTCCCGCCGGCCGTCAGGCTCTCTACGAAAAGCACCGCTACTCCGCCGCGATCCGTTC
CGGCGATCTGTTGTTCGTGTCAGGACAGGTCGGCAGCCGCGAGGACGGCTCGCCTGAACCTCAGTTCGAGGCACAGGTTC
AGCTCGCCTTCGATAATCTGGCCTCCGTCCTGAAGGCTGCCGGCTGCACATTTGCCGATATCGTCGACGTCACCTCGTTT
CACACCGATCCGGCAACGCAGCTGGACACCGTCCTGGCTGTGAAGAATCGAGCCTTCCCGCAGGAGCCCTATCCCAATTG
GACGGCTGTCGGAGTGACGTGGCTCGCAGGCTTCGACTTCGAGATCAAGGTGATTGCGCGGATCCCGACTGGCACCTGA

Upstream 100 bases:

>100_bases
ATCGCGCCGTCGACCTGCCTGCGCGGGCCGTGTTGTCGCACCCCTATGGAAAGATCATCGGTACGATCCACCTGCTCCTG
GTCCAAAGCAGGAGACAGGA

Downstream 100 bases:

>100_bases
TGGTTCAGGTCCCCGACACCCAGGCCAGCAGCAACGCGAAACCGGCGAGACCAACGGTGACGTGCGTGCCGAGCAGGACG
TTAGCACCGACCGGCGAGCG

Product: Endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSKSEVIFPAGRQALYEKHRYSAAIRSGDLLFVSGQVGSREDGSPEPQFEAQVQLAFDNLASVLKAAGCTFADIVDVTSF
HTDPATQLDTVLAVKNRAFPQEPYPNWTAVGVTWLAGFDFEIKVIARIPTGT

Sequences:

>Translated_132_residues
MSKSEVIFPAGRQALYEKHRYSAAIRSGDLLFVSGQVGSREDGSPEPQFEAQVQLAFDNLASVLKAAGCTFADIVDVTSF
HTDPATQLDTVLAVKNRAFPQEPYPNWTAVGVTWLAGFDFEIKVIARIPTGT
>Mature_131_residues
SKSEVIFPAGRQALYEKHRYSAAIRSGDLLFVSGQVGSREDGSPEPQFEAQVQLAFDNLASVLKAAGCTFADIVDVTSFH
TDPATQLDTVLAVKNRAFPQEPYPNWTAVGVTWLAGFDFEIKVIARIPTGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1790696, Length=129, Percent_Identity=73.6434108527132, Blast_Score=207, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14363; Mature: 14232

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSEVIFPAGRQALYEKHRYSAAIRSGDLLFVSGQVGSREDGSPEPQFEAQVQLAFDNL
CCCCCEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEHHHHH
ASVLKAAGCTFADIVDVTSFHTDPATQLDTVLAVKNRAFPQEPYPNWTAVGVTWLAGFDF
HHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCE
EIKVIARIPTGT
EEEEEEECCCCC
>Mature Secondary Structure 
SKSEVIFPAGRQALYEKHRYSAAIRSGDLLFVSGQVGSREDGSPEPQFEAQVQLAFDNL
CCCCEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEHHHHH
ASVLKAAGCTFADIVDVTSFHTDPATQLDTVLAVKNRAFPQEPYPNWTAVGVTWLAGFDF
HHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCE
EIKVIARIPTGT
EEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]