| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is bcp [H]
Identifier: 192291113
GI number: 192291113
Start: 2971421
End: 2972137
Strand: Reverse
Name: bcp [H]
Synonym: Rpal_2734
Alternate gene names: 192291113
Gene position: 2972137-2971421 (Counterclockwise)
Preceding gene: 192291115
Following gene: 192291112
Centisome position: 51.74
GC content: 66.53
Gene sequence:
>717_bases ATGCCCAAGCCGACGCCCAAGAAACCATCCAAGAAGACCGCCAAGCCCGCGGTCGAGAAAACCTCCAAGGTGACGACGAA GGCGGCAGCCAAGACCACCGCCGCGAAAACCACGGCCGTGAAGAAGGCCGCCGCCAAGTCACCCGCTGCAAAGGCGCCCG CAGCCAAGACGGCGGCGACGAAGGCTGCCGCAAAGCCAGCGGCCAAATCCGCCGCCCCCAAACCCTCGGCGACCAAGTCC TCCGCCACCAAGCCAGCGGGCCTGGCCGAAGGCAGCGTCGCGCCGGACTTCAAGCTGCCGCGCGATGGCGGCGGCGAGAT CTCGCGCGCCGACTTCGCCGGTCGCAAGCTGGTGCTGTTCTTCTACCCGAAGGCCAACACACCCGGCTGCACCCGTGAGG CGATCGACTTCACCCGCCTCGCCGCCGATTTCAAAGCCTGCGGCACGGCCGTCCTCGGCGTCTCGGCCGACTCGGTGAAG GCGCAGAACTCGTTCCGCGACAAGCATCAGCTGGCGACGCCGCTATTGTCCGACCCCACGCACGCGATGCTCGAAGCGTA TGGTGCCTGGGGCGAGAAATCGTTGTACGGCCGAAAGTTCCAAGGGATTATTCGCACCACGGTTTTGATCGACGCCGATG GCCGCGTCGCGCGGGTGTGGCGCAACGTGAAGGTCGACGGCCACGCCGATCAGGTGCTCGCTGCCGCGCAATCTTGA
Upstream 100 bases:
>100_bases ATACCCCGAGGTCGACGGATTTGCCCAGCAGCGGCAAACTCGCATCGTTTCCTGGCGATAATCGATGTTTGACCCTTCGA AAGCGACGAAAGGAAGGCGC
Downstream 100 bases:
>100_bases TAGTTTTCATTTTCTGAAAATTAACCATGCAGGGGTCAAATCGCACCGCGTCTTGAGCGGAACCGTGACGAGTTCCGTTC GGCGCGGGAGTTCCGATGTC
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MPKPTPKKPSKKTAKPAVEKTSKVTTKAAAKTTAAKTTAVKKAAAKSPAAKAPAAKTAATKAAAKPAAKSAAPKPSATKS SATKPAGLAEGSVAPDFKLPRDGGGEISRADFAGRKLVLFFYPKANTPGCTREAIDFTRLAADFKACGTAVLGVSADSVK AQNSFRDKHQLATPLLSDPTHAMLEAYGAWGEKSLYGRKFQGIIRTTVLIDADGRVARVWRNVKVDGHADQVLAAAQS
Sequences:
>Translated_238_residues MPKPTPKKPSKKTAKPAVEKTSKVTTKAAAKTTAAKTTAVKKAAAKSPAAKAPAAKTAATKAAAKPAAKSAAPKPSATKS SATKPAGLAEGSVAPDFKLPRDGGGEISRADFAGRKLVLFFYPKANTPGCTREAIDFTRLAADFKACGTAVLGVSADSVK AQNSFRDKHQLATPLLSDPTHAMLEAYGAWGEKSLYGRKFQGIIRTTVLIDADGRVARVWRNVKVDGHADQVLAAAQS >Mature_237_residues PKPTPKKPSKKTAKPAVEKTSKVTTKAAAKTTAAKTTAVKKAAAKSPAAKAPAAKTAATKAAAKPAAKSAAPKPSATKSS ATKPAGLAEGSVAPDFKLPRDGGGEISRADFAGRKLVLFFYPKANTPGCTREAIDFTRLAADFKACGTAVLGVSADSVKA QNSFRDKHQLATPLLSDPTHAMLEAYGAWGEKSLYGRKFQGIIRTTVLIDADGRVARVWRNVKVDGHADQVLAAAQS
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=146, Percent_Identity=41.0958904109589, Blast_Score=128, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6322180, Length=156, Percent_Identity=34.6153846153846, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 24682; Mature: 24551
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPTPKKPSKKTAKPAVEKTSKVTTKAAAKTTAAKTTAVKKAAAKSPAAKAPAAKTAAT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH KAAAKPAAKSAAPKPSATKSSATKPAGLAEGSVAPDFKLPRDGGGEISRADFAGRKLVLF HHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEE FYPKANTPGCTREAIDFTRLAADFKACGTAVLGVSADSVKAQNSFRDKHQLATPLLSDPT EECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCH HAMLEAYGAWGEKSLYGRKFQGIIRTTVLIDADGRVARVWRNVKVDGHADQVLAAAQS HHHHHHHCCCCCCCHHHHHHHHEEEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHCCC >Mature Secondary Structure PKPTPKKPSKKTAKPAVEKTSKVTTKAAAKTTAAKTTAVKKAAAKSPAAKAPAAKTAAT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH KAAAKPAAKSAAPKPSATKSSATKPAGLAEGSVAPDFKLPRDGGGEISRADFAGRKLVLF HHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEE FYPKANTPGCTREAIDFTRLAADFKACGTAVLGVSADSVKAQNSFRDKHQLATPLLSDPT EECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCH HAMLEAYGAWGEKSLYGRKFQGIIRTTVLIDADGRVARVWRNVKVDGHADQVLAAAQS HHHHHHHCCCCCCCHHHHHHHHEEEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]