| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291099
Identifier: 192291099
GI number: 192291099
Start: 2951298
End: 2952065
Strand: Reverse
Name: 192291099
Synonym: Rpal_2720
Alternate gene names: NA
Gene position: 2952065-2951298 (Counterclockwise)
Preceding gene: 192291100
Following gene: 192291095
Centisome position: 51.39
GC content: 63.8
Gene sequence:
>768_bases ATGCTGTCGTTCCGCCCGCTCGCCACAGCCCTGCTCGCGCTCGCCATCGTTGGCGCGCCGGCCGTCGCCTCGGCGCAGAA GTTCTCCGACGAGCAGCGGAGCCAGATCGAAACGATCATCAAGGAATATCTGGTGTCGCATCCCGAGGTGCTCGAAGAAG CCTCGGAAGAGCTCGGCAAGCGTCAGGCGGCGGCGCAGGCCGAGAAGCACCAGCAGGCGATCAAGGACAACGCCGACATC ATCTACAATTCGCCGCGCGGCGTGACGGTCGGCAACAAGAACGGCGACGTCACCATGGTCGAGTTCTTCGACTACAATTG CGGTTACTGCAAACGCGCGATGACCGACATGATGGAGCTGATGAAGGACGATCCGAACCTGAAGGTCGTTCTGAAGGAAT TCCCGGTGCTCGGCCCGCCCTCGGTCGAAGCCGCTCAGGTCGCGATCGCGGTGCGGATGCAGGACCCGACCGGCAAGAAG TATCTCGACTTCCACCAGAAGCTGCTCGGCGGCCGCGGTCAGGCAGACAAGGCGCGCGCGCTCGCTGCCGCGAAGGACGC CGGCCTCGACCCCGCCAAGATCGAGAAGGATATGAACAGCCCGGAAGTCCGCGCCACGATCGAAGAGAGCTTCAAGCTCG CGGAGTCGATGGGCATGAACGGCACGCCGAGCTACGTGATCGGCAAGCAGGTGGTGGTCGGCGCGGTCGGCCTCGACACG CTACGCCAGAAGATCAACACCGCACGCTGCGGCAAGGACAAGTGCTGA
Upstream 100 bases:
>100_bases TCGTGTTCACAAAAACCGCGTATTTGCCGGGGAAAAGCGCTATGAAACGTCCGAATCCATGCGTCTTTTCCACGACCTGA CCCGCCGAAGGGATCCGCCT
Downstream 100 bases:
>100_bases GCGCGATCGACGCCTGAGTTAGCATCGCCAGTCGCCGTGTGTCGCCGGCGCTGGCGATCTAGCCCAACGACGACGAGGCG CGTGTCAGTCCGACATGCGG
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: Outer Membrane Protein; Dsba Oxidoreductase; ThiolDisulfide Interchange Protein DsbA; DsbA Oxidoreductase; Twin-Arginine Translocation Pathway Signal; 27kDa Outer Membrane Protein; Thioredoxin Domain Protein; 27 KDa Outer Membrane Protein; Disulfide Oxidoreductase; Protein-Disulfide Isomerase; DSBA-Like Thioredoxin Domain-Containing Protein; Secreted Protein Suppressor For Copper-Sensitivity C; Suppressor For Copper-Sensitivity C; Metal Resistance Protein; Disulfide Bond Formation Protein D; DSBA-Like Thioredoxin Domain Protein; DsbA-Like Disulfide Oxidoreductase; Secreted Protein Suppressor For Copper-Sensitivity ScsC; ThiolDisulfide Oxidoreductase; Oxidoreductase; DSBA Family Oxidoreductase; Thioredoxin Domain-Containing Protein; BcfH Protein; ThiolDisulfide Interchange Protein; Disulfide Bonded Thioredoxin Protein; Thiol-Disulfide Isomerase; Copper-Sensitivity Suppressor C Protein; Secreted Copper-Sensitivity Suppressor C; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MLSFRPLATALLALAIVGAPAVASAQKFSDEQRSQIETIIKEYLVSHPEVLEEASEELGKRQAAAQAEKHQQAIKDNADI IYNSPRGVTVGNKNGDVTMVEFFDYNCGYCKRAMTDMMELMKDDPNLKVVLKEFPVLGPPSVEAAQVAIAVRMQDPTGKK YLDFHQKLLGGRGQADKARALAAAKDAGLDPAKIEKDMNSPEVRATIEESFKLAESMGMNGTPSYVIGKQVVVGAVGLDT LRQKINTARCGKDKC
Sequences:
>Translated_255_residues MLSFRPLATALLALAIVGAPAVASAQKFSDEQRSQIETIIKEYLVSHPEVLEEASEELGKRQAAAQAEKHQQAIKDNADI IYNSPRGVTVGNKNGDVTMVEFFDYNCGYCKRAMTDMMELMKDDPNLKVVLKEFPVLGPPSVEAAQVAIAVRMQDPTGKK YLDFHQKLLGGRGQADKARALAAAKDAGLDPAKIEKDMNSPEVRATIEESFKLAESMGMNGTPSYVIGKQVVVGAVGLDT LRQKINTARCGKDKC >Mature_255_residues MLSFRPLATALLALAIVGAPAVASAQKFSDEQRSQIETIIKEYLVSHPEVLEEASEELGKRQAAAQAEKHQQAIKDNADI IYNSPRGVTVGNKNGDVTMVEFFDYNCGYCKRAMTDMMELMKDDPNLKVVLKEFPVLGPPSVEAAQVAIAVRMQDPTGKK YLDFHQKLLGGRGQADKARALAAAKDAGLDPAKIEKDMNSPEVRATIEESFKLAESMGMNGTPSYVIGKQVVVGAVGLDT LRQKINTARCGKDKC
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27686; Mature: 27686
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSFRPLATALLALAIVGAPAVASAQKFSDEQRSQIETIIKEYLVSHPEVLEEASEELGK CCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RQAAAQAEKHQQAIKDNADIIYNSPRGVTVGNKNGDVTMVEFFDYNCGYCKRAMTDMMEL HHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCCCCEEEEEEECCCCHHHHHHHHHHHHH MKDDPNLKVVLKEFPVLGPPSVEAAQVAIAVRMQDPTGKKYLDFHQKLLGGRGQADKARA HHCCCCEEEHHHHCCCCCCCCCHHHEEEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHH LAAAKDAGLDPAKIEKDMNSPEVRATIEESFKLAESMGMNGTPSYVIGKQVVVGAVGLDT HHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LRQKINTARCGKDKC HHHHHHHHCCCCCCC >Mature Secondary Structure MLSFRPLATALLALAIVGAPAVASAQKFSDEQRSQIETIIKEYLVSHPEVLEEASEELGK CCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RQAAAQAEKHQQAIKDNADIIYNSPRGVTVGNKNGDVTMVEFFDYNCGYCKRAMTDMMEL HHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCCCCEEEEEEECCCCHHHHHHHHHHHHH MKDDPNLKVVLKEFPVLGPPSVEAAQVAIAVRMQDPTGKKYLDFHQKLLGGRGQADKARA HHCCCCEEEHHHHCCCCCCCCCHHHEEEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHH LAAAKDAGLDPAKIEKDMNSPEVRATIEESFKLAESMGMNGTPSYVIGKQVVVGAVGLDT HHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LRQKINTARCGKDKC HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA