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The map label for this gene is 192291088

Identifier: 192291088

GI number: 192291088

Start: 2941289

End: 2941960

Strand: Reverse

Name: 192291088

Synonym: Rpal_2709

Alternate gene names: NA

Gene position: 2941960-2941289 (Counterclockwise)

Preceding gene: 192291089

Following gene: 192291087

Centisome position: 51.22

GC content: 69.2

Gene sequence:

>672_bases
GTGCTTCCCTGGATTCAGTTGGCCACCGCGAAAGTACCCGGCGGCGGCGAATTGCGGCTGATGCGGCGCGGCGAGGAATT
CTCGATCCGGCTCGACGCCAACGAGCTGATGAACAGCCGGCTCGGCGGCTCCGAGGAGGCGCTCGCCACCCTCGCCTGTC
AGAAGCTGGCAGGCCGCCCTCGTCCGCGCGTCCTGGTCGGCGGGCTCGGTATGGGCTTCACGCTGCGCGCCGCGCTGAAA
GTGTTCGGCACCGACGCCACGATCGAGGTCGCCGAACTGGTGCCAGAGGTGATCGACTGGGGCCGCGGCGAGATGGCCGG
GCTTTTCGGCGTCAGCCTCACCGATCCCCGCGTCAGCATCCTGCAGCGCGACGTCGGTGAGCTGATCCGCGCCGGCGCGG
GGCGCTACGATGCGATCCTGCTCGACGTCGACAACGGCCCCGAAGGACTGTCGCGCCCTGCAAACGACCAGCTTTACGAC
AGCCGCGGCCTGTCCGATGCCCGCGCGGCGTTGCGCGGCGGCGGTGTGCTGGCGGTGTGGTCGTCGGGCCCCGATGACAG
CTTCACCAAGCGGCTGCGGCGCAGCGATTTCGTCGTCAACGAAGTCCCGGTACGTGCGGTCGGCAAGCGCACCGGCTCGC
GGCATTGGATCTGGCTCGCGGTCAAAACCTGA

Upstream 100 bases:

>100_bases
CCCGCCTGCGCACTACACAAGCCGCGGGTTCTCCGGCCGGACGAACCGCCGGTCCTCACCTTTTCTGCCGGCGACCTCTT
AGCGACCAAAGGCGATTGTT

Downstream 100 bases:

>100_bases
CCGGCCGAAACGTTGCCGGTGAACATATTGCTTTGGCGGCCGGTGCCCTAAGACCATTGCCACCTTGCCATTCTGTCGCA
CCTCGGGCAGCTTCCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MLPWIQLATAKVPGGGELRLMRRGEEFSIRLDANELMNSRLGGSEEALATLACQKLAGRPRPRVLVGGLGMGFTLRAALK
VFGTDATIEVAELVPEVIDWGRGEMAGLFGVSLTDPRVSILQRDVGELIRAGAGRYDAILLDVDNGPEGLSRPANDQLYD
SRGLSDARAALRGGGVLAVWSSGPDDSFTKRLRRSDFVVNEVPVRAVGKRTGSRHWIWLAVKT

Sequences:

>Translated_223_residues
MLPWIQLATAKVPGGGELRLMRRGEEFSIRLDANELMNSRLGGSEEALATLACQKLAGRPRPRVLVGGLGMGFTLRAALK
VFGTDATIEVAELVPEVIDWGRGEMAGLFGVSLTDPRVSILQRDVGELIRAGAGRYDAILLDVDNGPEGLSRPANDQLYD
SRGLSDARAALRGGGVLAVWSSGPDDSFTKRLRRSDFVVNEVPVRAVGKRTGSRHWIWLAVKT
>Mature_223_residues
MLPWIQLATAKVPGGGELRLMRRGEEFSIRLDANELMNSRLGGSEEALATLACQKLAGRPRPRVLVGGLGMGFTLRAALK
VFGTDATIEVAELVPEVIDWGRGEMAGLFGVSLTDPRVSILQRDVGELIRAGAGRYDAILLDVDNGPEGLSRPANDQLYD
SRGLSDARAALRGGGVLAVWSSGPDDSFTKRLRRSDFVVNEVPVRAVGKRTGSRHWIWLAVKT

Specific function: Unknown

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24077; Mature: 24077

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPWIQLATAKVPGGGELRLMRRGEEFSIRLDANELMNSRLGGSEEALATLACQKLAGRP
CCCCEEEEEEECCCCCCEEEEECCCEEEEEECHHHHHHHCCCCCHHHHHHHHHHHHHCCC
RPRVLVGGLGMGFTLRAALKVFGTDATIEVAELVPEVIDWGRGEMAGLFGVSLTDPRVSI
CCEEEEECCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHH
LQRDVGELIRAGAGRYDAILLDVDNGPEGLSRPANDQLYDSRGLSDARAALRGGGVLAVW
HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHCCCCCHHHHHHHCCCCEEEEE
SSGPDDSFTKRLRRSDFVVNEVPVRAVGKRTGSRHWIWLAVKT
CCCCCHHHHHHHHHCCCEECCCCHHHHHCCCCCCEEEEEEEEC
>Mature Secondary Structure
MLPWIQLATAKVPGGGELRLMRRGEEFSIRLDANELMNSRLGGSEEALATLACQKLAGRP
CCCCEEEEEEECCCCCCEEEEECCCEEEEEECHHHHHHHCCCCCHHHHHHHHHHHHHCCC
RPRVLVGGLGMGFTLRAALKVFGTDATIEVAELVPEVIDWGRGEMAGLFGVSLTDPRVSI
CCEEEEECCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHH
LQRDVGELIRAGAGRYDAILLDVDNGPEGLSRPANDQLYDSRGLSDARAALRGGGVLAVW
HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHCCCCCHHHHHHHCCCCEEEEE
SSGPDDSFTKRLRRSDFVVNEVPVRAVGKRTGSRHWIWLAVKT
CCCCCHHHHHHHHHCCCEECCCCHHHHHCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA