| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291077
Identifier: 192291077
GI number: 192291077
Start: 2930429
End: 2931058
Strand: Reverse
Name: 192291077
Synonym: Rpal_2698
Alternate gene names: NA
Gene position: 2931058-2930429 (Counterclockwise)
Preceding gene: 192291079
Following gene: 192291076
Centisome position: 51.03
GC content: 72.54
Gene sequence:
>630_bases ATGTTGAATTTTAGAACCTTGAGTGCCGTGGCCGCACTGGCTATCGCGCTTCCCCTGGCGGCGACGCCGAGCTTCGCGCA GGGCCCCGCAGTGGCGGGTGGCGGCGGTGGTGGCGCGCCGGCCGGTGGCGGCGGCGGTGGTGGTCCCGCCGTAGCAGGCG GAGGTGGCGGCGGTCCCGCGATGGGCATGGGCCGTGGCGGCGGTGGCGGCCCGGCGTTCGGCGGCGGCGGAATCAGCCGT GGCGGCTTGGCCGGCGCGGCAATCGCCCGCGGAGCTCCGGTTGGTCCGCGAGTCGCCGGTGGCGGCGGCGGTTGGCGAGG TGGTGGCGGCTGGCAAGGTGGCGGCGGATGGCACGGTGGTGGCGGCCGGCACTGGCACGGCGGCCGCCCTGGCTACTGGC GCGGTGGCGGATACTGGCCTGGCGTCGTGGTCGGGGGGGCACTCGCTGCTCCCTATTCCTACGGCTATTACGGCGCCCCG TATGACTATGGCGATTACGACGAGCCGATCGTGACGGTAGCCCCAGATGACGACGGCGGCGACGCCTACTGCCGACGCCG CTACAAGTCCTATGATCCGGCGTCCGGTACCTATCTCGGCTACGACGGTCGCCGGCATCCCTGCCCGTAA
Upstream 100 bases:
>100_bases GGATCAGCTTTCGCCGATAAGCGGCGGAATGGGAACGACGGCGATCCAGCCGTGTTGAGACCGCGGGCGTTCCAAGCCAA TCCCGTCGATGGAGCCGATA
Downstream 100 bases:
>100_bases TTCGTCCGTCCTTTTGGTTGTTTCGCGAGCGGCGCCCTCACCGGCGCCGCTTTTGTTTTGCACGCGACGAACCTGCGGCG ATCGGACTCACCTAGCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MLNFRTLSAVAALAIALPLAATPSFAQGPAVAGGGGGGAPAGGGGGGGPAVAGGGGGGPAMGMGRGGGGGPAFGGGGISR GGLAGAAIARGAPVGPRVAGGGGGWRGGGGWQGGGGWHGGGGRHWHGGRPGYWRGGGYWPGVVVGGALAAPYSYGYYGAP YDYGDYDEPIVTVAPDDDGGDAYCRRRYKSYDPASGTYLGYDGRRHPCP
Sequences:
>Translated_209_residues MLNFRTLSAVAALAIALPLAATPSFAQGPAVAGGGGGGAPAGGGGGGGPAVAGGGGGGPAMGMGRGGGGGPAFGGGGISR GGLAGAAIARGAPVGPRVAGGGGGWRGGGGWQGGGGWHGGGGRHWHGGRPGYWRGGGYWPGVVVGGALAAPYSYGYYGAP YDYGDYDEPIVTVAPDDDGGDAYCRRRYKSYDPASGTYLGYDGRRHPCP >Mature_209_residues MLNFRTLSAVAALAIALPLAATPSFAQGPAVAGGGGGGAPAGGGGGGGPAVAGGGGGGPAMGMGRGGGGGPAFGGGGISR GGLAGAAIARGAPVGPRVAGGGGGWRGGGGWQGGGGWHGGGGRHWHGGRPGYWRGGGYWPGVVVGGALAAPYSYGYYGAP YDYGDYDEPIVTVAPDDDGGDAYCRRRYKSYDPASGTYLGYDGRRHPCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19939; Mature: 19939
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNFRTLSAVAALAIALPLAATPSFAQGPAVAGGGGGGAPAGGGGGGGPAVAGGGGGGPA CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC MGMGRGGGGGPAFGGGGISRGGLAGAAIARGAPVGPRVAGGGGGWRGGGGWQGGGGWHGG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC GGRHWHGGRPGYWRGGGYWPGVVVGGALAAPYSYGYYGAPYDYGDYDEPIVTVAPDDDGG CCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCH DAYCRRRYKSYDPASGTYLGYDGRRHPCP HHHHHHHHCCCCCCCCCEECCCCCCCCCC >Mature Secondary Structure MLNFRTLSAVAALAIALPLAATPSFAQGPAVAGGGGGGAPAGGGGGGGPAVAGGGGGGPA CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC MGMGRGGGGGPAFGGGGISRGGLAGAAIARGAPVGPRVAGGGGGWRGGGGWQGGGGWHGG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC GGRHWHGGRPGYWRGGGYWPGVVVGGALAAPYSYGYYGAPYDYGDYDEPIVTVAPDDDGG CCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCH DAYCRRRYKSYDPASGTYLGYDGRRHPCP HHHHHHHHCCCCCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA