| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291024
Identifier: 192291024
GI number: 192291024
Start: 2866999
End: 2867535
Strand: Reverse
Name: 192291024
Synonym: Rpal_2643
Alternate gene names: NA
Gene position: 2867535-2866999 (Counterclockwise)
Preceding gene: 192291025
Following gene: 192291023
Centisome position: 49.92
GC content: 61.08
Gene sequence:
>537_bases ATGACGTCGGACAAGCAGGGTGATTACAAGCGGTATGTGTGGTTCAGTCCATGTGATGACGGTATCGCGCTTCGGTTTGA ACCGACATTCGATATCTCGCTCGGATCAGAGCGGCGTGCGAGGGGGGCCGTTCGCCGGGTGTTGAGGCTTTTGCGCAGAC TGCGTCTCCAGGCCTGCATCGACGGCAATGGAGTCGACGCGACGATCCGACAGCCCTCGGTCGATATGTCCAAACTACTC GCAGCCGTCGACGCCGAGATCGTCGCCTTTCAAGCCGAACGCATTCACCCAAAGGAGCTGGACGAGATTCTCACGATCAC CCCTCACGAGCGCCGTCGCTGGACCAAGGACGGCCGGCTGCCGACGTCTGGCCACACCTCCTTCCGGAACGGCAAGAAGT CGGTGTTTCTAGTGCTGTACCCACCAGCTCCGATCAGGGCGCTGGCCGACCGTCCGGAGCAGATCGAAGCTTGGCGCCGA ACCGATGCGATCACTTCCGCGCACGCAATTTCCAGCGACGGCGCTTCGACAGCTTGA
Upstream 100 bases:
>100_bases CCACGTCGATGAAAATCGCAACTCGTTCTCACCCTATTCGACGAATTGACCTGATCCGGGGGAGACAAAACAGTGCGTAT CGGAAACGCCTCGGTGGAGC
Downstream 100 bases:
>100_bases CAAGAACGTCGCCTGGAGCACTACATATTGTATTCGCGGTCTCTCGAATCGTTTGATCGAGGGCTAAGAGGGAATTCGGT GCGGCGTTACCGCCCAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTSDKQGDYKRYVWFSPCDDGIALRFEPTFDISLGSERRARGAVRRVLRLLRRLRLQACIDGNGVDATIRQPSVDMSKLL AAVDAEIVAFQAERIHPKELDEILTITPHERRRWTKDGRLPTSGHTSFRNGKKSVFLVLYPPAPIRALADRPEQIEAWRR TDAITSAHAISSDGASTA
Sequences:
>Translated_178_residues MTSDKQGDYKRYVWFSPCDDGIALRFEPTFDISLGSERRARGAVRRVLRLLRRLRLQACIDGNGVDATIRQPSVDMSKLL AAVDAEIVAFQAERIHPKELDEILTITPHERRRWTKDGRLPTSGHTSFRNGKKSVFLVLYPPAPIRALADRPEQIEAWRR TDAITSAHAISSDGASTA >Mature_177_residues TSDKQGDYKRYVWFSPCDDGIALRFEPTFDISLGSERRARGAVRRVLRLLRRLRLQACIDGNGVDATIRQPSVDMSKLLA AVDAEIVAFQAERIHPKELDEILTITPHERRRWTKDGRLPTSGHTSFRNGKKSVFLVLYPPAPIRALADRPEQIEAWRRT DAITSAHAISSDGASTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20026; Mature: 19895
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDKQGDYKRYVWFSPCDDGIALRFEPTFDISLGSERRARGAVRRVLRLLRRLRLQACI CCCCCCCCEEEEEEECCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC DGNGVDATIRQPSVDMSKLLAAVDAEIVAFQAERIHPKELDEILTITPHERRRWTKDGRL CCCCCEEEEECCCCCHHHHHHHHHHHHEEHHHHCCCHHHHHHEEECCCCHHHHCCCCCCC PTSGHTSFRNGKKSVFLVLYPPAPIRALADRPEQIEAWRRTDAITSAHAISSDGASTA CCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TSDKQGDYKRYVWFSPCDDGIALRFEPTFDISLGSERRARGAVRRVLRLLRRLRLQACI CCCCCCCEEEEEEECCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC DGNGVDATIRQPSVDMSKLLAAVDAEIVAFQAERIHPKELDEILTITPHERRRWTKDGRL CCCCCEEEEECCCCCHHHHHHHHHHHHEEHHHHCCCHHHHHHEEECCCCHHHHCCCCCCC PTSGHTSFRNGKKSVFLVLYPPAPIRALADRPEQIEAWRRTDAITSAHAISSDGASTA CCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA