| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291018
Identifier: 192291018
GI number: 192291018
Start: 2858517
End: 2859137
Strand: Reverse
Name: 192291018
Synonym: Rpal_2637
Alternate gene names: NA
Gene position: 2859137-2858517 (Counterclockwise)
Preceding gene: 192291019
Following gene: 192291017
Centisome position: 49.78
GC content: 66.67
Gene sequence:
>621_bases ATGCTGGTCCGGATCGCGCTGCTGCGCGAGCCGCCTCGCCGAAGCGACCTGCGATCCGCCGACCTGCAACCGCCGATCGG TGAGGATCGGGACGATCCGTGGCGACGCCAACTCAGCATCGGCCACGGCTGCTCCGGGCCGGATCTTGCGACACCGTCGA TCAGCGCGCTCGATATGGGACCCGACCACCAGCAAGCGAACGGGCGGATCGCCGTGTGCGTGGTCGGCGACGGTGACGTC GTCGTCCAACTGCTGGAACGTCTGACGGATATTGGCGTTCGCGTGCACGCCACCGCGGATACGATCGATGATTACATCGC CGTCAAGCGCATCGGCGCCGTCCCGCATCGGTTCGAAGACATGCCGGCAGTCGCCGCGGGAATCGACCTGCTGATTTCCA CGAGCTTCTCCAGGCCGATCGGCGCGACCGTGCTGGCCCGGCTTCCCGAATCCGCCGTCGTCATCGATCTCGCCGGCCTG CCCGGCAGCGTCGATTTCGAAGTCGCGCAGCGGCTCGCTCGTCGGACGATCTGGGAGCCGCCGGTCGATCGACACTTCGA CGCGAGCTGGCGCAGCGTAGCCGATCAGATCGAGAGGCTTGAAGCCAGTAAGAGCGGCTGA
Upstream 100 bases:
>100_bases CGGACCGTCCGGCGGCATCGAAACGGCGCGACGCACACGACGATGGCGTTGGCGCGCGCTGGCATGGCGGCTGCAATTCC AATTCTGGCGGGGATTGGAG
Downstream 100 bases:
>100_bases GTGCCGGGACGCGGCGCGGATGCCGTACGCCGGAATGCGAATTGCTACTTTCACCTGCAACGCGGGCGACAACGCAACTT TCCAGAAGCTTCGAACCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLVRIALLREPPRRSDLRSADLQPPIGEDRDDPWRRQLSIGHGCSGPDLATPSISALDMGPDHQQANGRIAVCVVGDGDV VVQLLERLTDIGVRVHATADTIDDYIAVKRIGAVPHRFEDMPAVAAGIDLLISTSFSRPIGATVLARLPESAVVIDLAGL PGSVDFEVAQRLARRTIWEPPVDRHFDASWRSVADQIERLEASKSG
Sequences:
>Translated_206_residues MLVRIALLREPPRRSDLRSADLQPPIGEDRDDPWRRQLSIGHGCSGPDLATPSISALDMGPDHQQANGRIAVCVVGDGDV VVQLLERLTDIGVRVHATADTIDDYIAVKRIGAVPHRFEDMPAVAAGIDLLISTSFSRPIGATVLARLPESAVVIDLAGL PGSVDFEVAQRLARRTIWEPPVDRHFDASWRSVADQIERLEASKSG >Mature_206_residues MLVRIALLREPPRRSDLRSADLQPPIGEDRDDPWRRQLSIGHGCSGPDLATPSISALDMGPDHQQANGRIAVCVVGDGDV VVQLLERLTDIGVRVHATADTIDDYIAVKRIGAVPHRFEDMPAVAAGIDLLISTSFSRPIGATVLARLPESAVVIDLAGL PGSVDFEVAQRLARRTIWEPPVDRHFDASWRSVADQIERLEASKSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22362; Mature: 22362
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVRIALLREPPRRSDLRSADLQPPIGEDRDDPWRRQLSIGHGCSGPDLATPSISALDMG CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEECCC PDHQQANGRIAVCVVGDGDVVVQLLERLTDIGVRVHATADTIDDYIAVKRIGAVPHRFED CCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCHHHC MPAVAAGIDLLISTSFSRPIGATVLARLPESAVVIDLAGLPGSVDFEVAQRLARRTIWEP CCHHHHHHHHEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCC PVDRHFDASWRSVADQIERLEASKSG CCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLVRIALLREPPRRSDLRSADLQPPIGEDRDDPWRRQLSIGHGCSGPDLATPSISALDMG CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEECCC PDHQQANGRIAVCVVGDGDVVVQLLERLTDIGVRVHATADTIDDYIAVKRIGAVPHRFED CCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCHHHC MPAVAAGIDLLISTSFSRPIGATVLARLPESAVVIDLAGLPGSVDFEVAQRLARRTIWEP CCHHHHHHHHEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCC PVDRHFDASWRSVADQIERLEASKSG CCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA