Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is rhbC [H]

Identifier: 192291013

GI number: 192291013

Start: 2850353

End: 2852134

Strand: Reverse

Name: rhbC [H]

Synonym: Rpal_2632

Alternate gene names: 192291013

Gene position: 2852134-2850353 (Counterclockwise)

Preceding gene: 192291015

Following gene: 192291012

Centisome position: 49.65

GC content: 63.24

Gene sequence:

>1782_bases
ATGCACGAATCCATGCGCGAAATCGCTGAACGCGCAACATTCCAGAGCTTTGCAAATTGCTATCGGCGCGAGATCGACCC
CGGAATGCCCTCGCAGCATCGGCCGGAGTGCGGGGATCGGCGGACCTACGTCGAGTGGTCTTGCCCAATGGCAGCTGCGA
CATTACGCGCCGAGGTCGAGCGGGAGTCGCTGTGCGGCCCGCTCCGCTTCGGGCGAGTCTTCATTTGCCGAGCACCGGAC
AATGCCTGGCACGAAATCGCACCTCTGCGCGCGCTCTATCTGATGGTGCAAGAATGCTATTCAGGAATCGGCGCCGCACG
AGCGGAAGCGCTGCGCAATGAGGAGGCAGAGCTGCTTGGCCGCGTACTTGCGAGCTATCAGTGCATTGCGGATAGCCTGC
AGCGCTCATCCGGGGAGGCCGGCAGAACCTTCCTCGACGGCGAACAGAGCCTGATGTTTGGGCATTGGCTGCACCCGACG
CCGAAGAGCCGGCAAGGCATGGCCGACTGGCAGCAGCCCACTTATGCGCCGGAGCACCGTGGCCGGTTCCAACTGACATA
CTTTGCCGTCGACGCGGAATTGTTACGTCGCGGCAGCACAGGTGACGTTTCCGTCTCTGGCATTCTCAAGACGCTCCTCC
CTGAGGCCGACCGCCCGACGTTGCGTCCGGGCGAAGCGCTGATTCCACTCCACCCGCTGCAGGCCGAAGCGGTGATGCTC
TCGCCCGATATCGCGGAGCTCGCCCGGGAAGGCCGGCTTCGCCGCCTCGGCCCATTGGGCGCCGAGTTCTCGCCGACCTC
CTCGGTGCGCACGGTTTACAGCCCCGCGATTCCGTGGATGCTGAAATTCTCTCTGCCGGTGCGGATCACCAACTCCTTGC
GGATCAATCGGATGCCCGAGCTTAAAGCCGGGGTCGCGATGTCGCGGCTGTTCGCACGAACCGATTTCCTCGCGCGCCAT
CCTTGCTTCAGATTGATCGGCGATCCTGCCTACCTGACGCTCGCCCTCCCCGGCCGCACCGAAAGCGGATTCGAAATCAT
CTTCCGGGAAAATCCATTCACAACGGGCAACGAGACCAAGGGCATCACGATCGCAGCCCTGACGGCCGACCCTCCGCCTC
ACGCCCGCTCGCGGCTCGACGTGTTGGTGCGAGAATATGCGGCGCAGCAGGGCTTGCCGGTGGCGAACGCTTGCCGGCAT
TGGTTCTCGGCCTATCTCGATTGCGCGCTGGACCCGCTCGTCAGGCTCTACAACGAGCTCGGCGTCGCGCTAGAGGCGCA
TCAGCAGAACGTGTTGCTCGACGTCTCGTCCGGCCTGCCGACCGCGTCCTATTATCGGGACAATCAGGGCTTCTACCTAT
CGAATGCCCATCGCGATCGGCTGGTCTCCCTCGTACCCGAAACCGCAGAGATCGGTGGTCTGTATTTCGACGATCGGGTG
ATCCAGGAGCGGTTCGCCTATTACCTGATCGTCAATCAGATCTGCTCGATGATCGCCCGCATGGGGCAGGATCGGCTGAG
CGACGAAGAAGCGCTGCTGATTATGTTACGCGAGCGGCTCAACGACTTGGCGCACGAACTCGGCGGGGTCGGACGCGACT
TCGCCTCTGGAATCGTCGACCGCCCGACCGTTGCCGCCAAGGCCAACCTCCTGACACGGATGCTCGACATCGACGAGCTG
GAGGCCGAGGACGGCCGCGCGATCTATGTGCAGCTGCCAAATCCACTGTTTGGCGATCGCCGCGCGGCGCGACGGGGAGA
AGCTCGTGTCGCTTCCCGGTGA

Upstream 100 bases:

>100_bases
TCTAAACTATGCACCCCGGCTACGATTACGGGTCTGGCCGCCGTCGACCGTTGATACCATACGGCCATGCAATTCGGGCC
GCTTCGCGGAAGACATACCG

Downstream 100 bases:

>100_bases
CATCCCCGCCCGGCCGGAGGAGCGGGTCGTGCGCCAACTCACCGCAGCGGCGTTGTACGAAAACCTGTTCGGTCCTTTGG
CGTTGGCGTACGCCCCAGGG

Product: IucA/IucC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MHESMREIAERATFQSFANCYRREIDPGMPSQHRPECGDRRTYVEWSCPMAAATLRAEVERESLCGPLRFGRVFICRAPD
NAWHEIAPLRALYLMVQECYSGIGAARAEALRNEEAELLGRVLASYQCIADSLQRSSGEAGRTFLDGEQSLMFGHWLHPT
PKSRQGMADWQQPTYAPEHRGRFQLTYFAVDAELLRRGSTGDVSVSGILKTLLPEADRPTLRPGEALIPLHPLQAEAVML
SPDIAELAREGRLRRLGPLGAEFSPTSSVRTVYSPAIPWMLKFSLPVRITNSLRINRMPELKAGVAMSRLFARTDFLARH
PCFRLIGDPAYLTLALPGRTESGFEIIFRENPFTTGNETKGITIAALTADPPPHARSRLDVLVREYAAQQGLPVANACRH
WFSAYLDCALDPLVRLYNELGVALEAHQQNVLLDVSSGLPTASYYRDNQGFYLSNAHRDRLVSLVPETAEIGGLYFDDRV
IQERFAYYLIVNQICSMIARMGQDRLSDEEALLIMLRERLNDLAHELGGVGRDFASGIVDRPTVAAKANLLTRMLDIDEL
EAEDGRAIYVQLPNPLFGDRRAARRGEARVASR

Sequences:

>Translated_593_residues
MHESMREIAERATFQSFANCYRREIDPGMPSQHRPECGDRRTYVEWSCPMAAATLRAEVERESLCGPLRFGRVFICRAPD
NAWHEIAPLRALYLMVQECYSGIGAARAEALRNEEAELLGRVLASYQCIADSLQRSSGEAGRTFLDGEQSLMFGHWLHPT
PKSRQGMADWQQPTYAPEHRGRFQLTYFAVDAELLRRGSTGDVSVSGILKTLLPEADRPTLRPGEALIPLHPLQAEAVML
SPDIAELAREGRLRRLGPLGAEFSPTSSVRTVYSPAIPWMLKFSLPVRITNSLRINRMPELKAGVAMSRLFARTDFLARH
PCFRLIGDPAYLTLALPGRTESGFEIIFRENPFTTGNETKGITIAALTADPPPHARSRLDVLVREYAAQQGLPVANACRH
WFSAYLDCALDPLVRLYNELGVALEAHQQNVLLDVSSGLPTASYYRDNQGFYLSNAHRDRLVSLVPETAEIGGLYFDDRV
IQERFAYYLIVNQICSMIARMGQDRLSDEEALLIMLRERLNDLAHELGGVGRDFASGIVDRPTVAAKANLLTRMLDIDEL
EAEDGRAIYVQLPNPLFGDRRAARRGEARVASR
>Mature_593_residues
MHESMREIAERATFQSFANCYRREIDPGMPSQHRPECGDRRTYVEWSCPMAAATLRAEVERESLCGPLRFGRVFICRAPD
NAWHEIAPLRALYLMVQECYSGIGAARAEALRNEEAELLGRVLASYQCIADSLQRSSGEAGRTFLDGEQSLMFGHWLHPT
PKSRQGMADWQQPTYAPEHRGRFQLTYFAVDAELLRRGSTGDVSVSGILKTLLPEADRPTLRPGEALIPLHPLQAEAVML
SPDIAELAREGRLRRLGPLGAEFSPTSSVRTVYSPAIPWMLKFSLPVRITNSLRINRMPELKAGVAMSRLFARTDFLARH
PCFRLIGDPAYLTLALPGRTESGFEIIFRENPFTTGNETKGITIAALTADPPPHARSRLDVLVREYAAQQGLPVANACRH
WFSAYLDCALDPLVRLYNELGVALEAHQQNVLLDVSSGLPTASYYRDNQGFYLSNAHRDRLVSLVPETAEIGGLYFDDRV
IQERFAYYLIVNQICSMIARMGQDRLSDEEALLIMLRERLNDLAHELGGVGRDFASGIVDRPTVAAKANLLTRMLDIDEL
EAEDGRAIYVQLPNPLFGDRRAARRGEARVASR

Specific function: Unknown

COG id: COG4264

COG function: function code Q; Siderophore synthetase component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iucA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007310
- InterPro:   IPR022770 [H]

Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]

EC number: NA

Molecular weight: Translated: 66371; Mature: 66371

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHESMREIAERATFQSFANCYRREIDPGMPSQHRPECGDRRTYVEWSCPMAAATLRAEVE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
RESLCGPLRFGRVFICRAPDNAWHEIAPLRALYLMVQECYSGIGAARAEALRNEEAELLG
HHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
RVLASYQCIADSLQRSSGEAGRTFLDGEQSLMFGHWLHPTPKSRQGMADWQQPTYAPEHR
HHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
GRFQLTYFAVDAELLRRGSTGDVSVSGILKTLLPEADRPTLRPGEALIPLHPLQAEAVML
CCEEEEEEEECHHHHHCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEE
SPDIAELAREGRLRRLGPLGAEFSPTSSVRTVYSPAIPWMLKFSLPVRITNSLRINRMPE
CCCHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCEEEECCEEECCCCC
LKAGVAMSRLFARTDFLARHPCFRLIGDPAYLTLALPGRTESGFEIIFRENPFTTGNETK
HHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCC
GITIAALTADPPPHARSRLDVLVREYAAQQGLPVANACRHWFSAYLDCALDPLVRLYNEL
CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVALEAHQQNVLLDVSSGLPTASYYRDNQGFYLSNAHRDRLVSLVPETAEIGGLYFDDRV
CCEEEECCCCEEEEECCCCCCHHHEECCCCEEECCCCHHHHHHHCCCHHHHCCEEEHHHH
IQERFAYYLIVNQICSMIARMGQDRLSDEEALLIMLRERLNDLAHELGGVGRDFASGIVD
HHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
RPTVAAKANLLTRMLDIDELEAEDGRAIYVQLPNPLFGDRRAARRGEARVASR
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MHESMREIAERATFQSFANCYRREIDPGMPSQHRPECGDRRTYVEWSCPMAAATLRAEVE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
RESLCGPLRFGRVFICRAPDNAWHEIAPLRALYLMVQECYSGIGAARAEALRNEEAELLG
HHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
RVLASYQCIADSLQRSSGEAGRTFLDGEQSLMFGHWLHPTPKSRQGMADWQQPTYAPEHR
HHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
GRFQLTYFAVDAELLRRGSTGDVSVSGILKTLLPEADRPTLRPGEALIPLHPLQAEAVML
CCEEEEEEEECHHHHHCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEE
SPDIAELAREGRLRRLGPLGAEFSPTSSVRTVYSPAIPWMLKFSLPVRITNSLRINRMPE
CCCHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCEEEECCEEECCCCC
LKAGVAMSRLFARTDFLARHPCFRLIGDPAYLTLALPGRTESGFEIIFRENPFTTGNETK
HHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCC
GITIAALTADPPPHARSRLDVLVREYAAQQGLPVANACRHWFSAYLDCALDPLVRLYNEL
CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVALEAHQQNVLLDVSSGLPTASYYRDNQGFYLSNAHRDRLVSLVPETAEIGGLYFDDRV
CCEEEECCCCEEEEECCCCCCHHHEECCCCEEECCCCHHHHHHHCCCHHHHCCEEEHHHH
IQERFAYYLIVNQICSMIARMGQDRLSDEEALLIMLRERLNDLAHELGGVGRDFASGIVD
HHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
RPTVAAKANLLTRMLDIDELEAEDGRAIYVQLPNPLFGDRRAARRGEARVASR
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11274118; 11481432 [H]