| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290912
Identifier: 192290912
GI number: 192290912
Start: 2730323
End: 2730463
Strand: Reverse
Name: 192290912
Synonym: Rpal_2529
Alternate gene names: NA
Gene position: 2730463-2730323 (Counterclockwise)
Preceding gene: 192290913
Following gene: 192290909
Centisome position: 47.54
GC content: 65.25
Gene sequence:
>141_bases ATGACCGGCGGCACCCGTTTCACCCGCATCCTGCGCAACCCGGCACGGCCGAAACCGCCGACCGTGGAGATGATCGAACG GATGAGCGCGGAGGCCGAGCTGGGGCTGGGGAATATCAAGAGGATTGTGGAGCGGCGATGA
Upstream 100 bases:
>100_bases CCTGGTATCCGACCGTCCGCCTGGTGCGCCAAACCCGGCCGCAGGACTGGGACGGCGTCGTGACCAAACTCGCCGCAACG CTGACGCGCTTCATCGAGAC
Downstream 100 bases:
>100_bases GCCGACCGGCGAAGCGGTGGCCAACAGGGTCGACACGGCCTAATGGCCGCTATGGGCCAGAACCGGACGTCAATGCACCC CGCCCCGGAAGGTCCGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 46; Mature: 45
Protein sequence:
>46_residues MTGGTRFTRILRNPARPKPPTVEMIERMSAEAELGLGNIKRIVERR
Sequences:
>Translated_46_residues MTGGTRFTRILRNPARPKPPTVEMIERMSAEAELGLGNIKRIVERR >Mature_45_residues TGGTRFTRILRNPARPKPPTVEMIERMSAEAELGLGNIKRIVERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5250; Mature: 5119
Theoretical pI: Translated: 12.05; Mature: 12.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGGTRFTRILRNPARPKPPTVEMIERMSAEAELGLGNIKRIVERR CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure TGGTRFTRILRNPARPKPPTVEMIERMSAEAELGLGNIKRIVERR CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA