Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is 192290895

Identifier: 192290895

GI number: 192290895

Start: 2710703

End: 2711674

Strand: Reverse

Name: 192290895

Synonym: Rpal_2512

Alternate gene names: NA

Gene position: 2711674-2710703 (Counterclockwise)

Preceding gene: 192290896

Following gene: 192290894

Centisome position: 47.21

GC content: 63.58

Gene sequence:

>972_bases
ATGAGGCAGCAGACGGCTCGATTTGCAGCCGCGATCACCCTGCTGATCACCCTGGGCGCGACGGCAGCACCGACGTACGC
GGAGGAGGCTGCGGTCGATCGGATCGACGCCGCGCTGCAGAACATCACCAGCATCGTCCGCGCCAAGAAGGTCGGCTACG
CGACGATCTGGGACGGCAACAAATACATCCAGTGCCGCCGCCTGCCGAGCCGCGAGATGCGCTGCGAAGCTGCCGGCCCG
ACGCTGCAACCAACGTTGAAGCACGTCCTGACGATCGAACGGCAAAATCGGCTCGCGGCGCTCGGCTGGACTATAGATCC
GGCTTTCGGCAACTACGCGAAAGTGTTTCCGGCTGACGCGCCGATCGGCCAGATCTCTGCAGACATCTTACGCACGCTGA
CTGATGGCTACGACATCAACCTTCAAGACCTCGAACTGAAAACCGACTGGGTGGTCGACATCCCCTGCCCGCCGCGAAAC
GGGCCGTCCCAGAATCTCGCCGGCATGGTCAGCGGCGCACCGTCGATGCGTTCCACGGCGCTACTCACTTGCTCCTATGC
GGCGAAACCGCAGCCGCAGACCGCCGAAACTGCGGAAGCGCTGATCAAGCTGTACGGTCCGTCGGTCACAGCAGAGATTC
AGCGACTGCGCGTGAACGCGGCACATCGGGTCTATGCAGTGTTCGACAGCGGCATCGGCTACATCCAGTGCATGCCGGAG
ACGCCGCCGGTGGCGTTGTATTGCGAGGCCGCGTCGGCCGAAAGCTGGACGGCGTTGAGCGCCGTCCTGAATCCGGATCG
CGTCGGCCGCCTGACGGCCGCCGGCTACAAGGAGCCCGGCCGCGCGCCAAACTACAGCAAAAGCTATCCGTTGACGCTGA
CGGACGCCGCGATCGCCGCCGAAATCCTCACATTGCTGCACGACGTCTACAACTACACCGGCGCAACCAAGCTGGACGTC
AAGACCGAATAG

Upstream 100 bases:

>100_bases
TGGTATCAACCTAAGGTTGACTCGGCAATATCTTCGTTCACTCTATGTTCCATCAACGGAGCGCAGCCGCTGCAGCGGCC
AGAGTGAGCGGAGGAAGTTC

Downstream 100 bases:

>100_bases
AGCCGCCCCCACGGCATTGCAAACGCTGTCGTCGCTGCGTGCATCGCAGCAACTGACTGATCACAACTTCACTAGCTGGC
TCGCTTCGCTCTCCCCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MRQQTARFAAAITLLITLGATAAPTYAEEAAVDRIDAALQNITSIVRAKKVGYATIWDGNKYIQCRRLPSREMRCEAAGP
TLQPTLKHVLTIERQNRLAALGWTIDPAFGNYAKVFPADAPIGQISADILRTLTDGYDINLQDLELKTDWVVDIPCPPRN
GPSQNLAGMVSGAPSMRSTALLTCSYAAKPQPQTAETAEALIKLYGPSVTAEIQRLRVNAAHRVYAVFDSGIGYIQCMPE
TPPVALYCEAASAESWTALSAVLNPDRVGRLTAAGYKEPGRAPNYSKSYPLTLTDAAIAAEILTLLHDVYNYTGATKLDV
KTE

Sequences:

>Translated_323_residues
MRQQTARFAAAITLLITLGATAAPTYAEEAAVDRIDAALQNITSIVRAKKVGYATIWDGNKYIQCRRLPSREMRCEAAGP
TLQPTLKHVLTIERQNRLAALGWTIDPAFGNYAKVFPADAPIGQISADILRTLTDGYDINLQDLELKTDWVVDIPCPPRN
GPSQNLAGMVSGAPSMRSTALLTCSYAAKPQPQTAETAEALIKLYGPSVTAEIQRLRVNAAHRVYAVFDSGIGYIQCMPE
TPPVALYCEAASAESWTALSAVLNPDRVGRLTAAGYKEPGRAPNYSKSYPLTLTDAAIAAEILTLLHDVYNYTGATKLDV
KTE
>Mature_323_residues
MRQQTARFAAAITLLITLGATAAPTYAEEAAVDRIDAALQNITSIVRAKKVGYATIWDGNKYIQCRRLPSREMRCEAAGP
TLQPTLKHVLTIERQNRLAALGWTIDPAFGNYAKVFPADAPIGQISADILRTLTDGYDINLQDLELKTDWVVDIPCPPRN
GPSQNLAGMVSGAPSMRSTALLTCSYAAKPQPQTAETAEALIKLYGPSVTAEIQRLRVNAAHRVYAVFDSGIGYIQCMPE
TPPVALYCEAASAESWTALSAVLNPDRVGRLTAAGYKEPGRAPNYSKSYPLTLTDAAIAAEILTLLHDVYNYTGATKLDV
KTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34930; Mature: 34930

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQQTARFAAAITLLITLGATAAPTYAEEAAVDRIDAALQNITSIVRAKKVGYATIWDGN
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
KYIQCRRLPSREMRCEAAGPTLQPTLKHVLTIERQNRLAALGWTIDPAFGNYAKVFPADA
CEEEEECCCCHHCEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCCCC
PIGQISADILRTLTDGYDINLQDLELKTDWVVDIPCPPRNGPSQNLAGMVSGAPSMRSTA
CCHHHHHHHHHHHHCCCCCCEEEEEEECCEEEECCCCCCCCCCCCHHHHHCCCCCCCCEE
LLTCSYAAKPQPQTAETAEALIKLYGPSVTAEIQRLRVNAAHRVYAVFDSGIGYIQCMPE
EEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEEEEEECCCCEEEEECC
TPPVALYCEAASAESWTALSAVLNPDRVGRLTAAGYKEPGRAPNYSKSYPLTLTDAAIAA
CCCEEEEEECCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEHHHHHH
EILTLLHDVYNYTGATKLDVKTE
HHHHHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure
MRQQTARFAAAITLLITLGATAAPTYAEEAAVDRIDAALQNITSIVRAKKVGYATIWDGN
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
KYIQCRRLPSREMRCEAAGPTLQPTLKHVLTIERQNRLAALGWTIDPAFGNYAKVFPADA
CEEEEECCCCHHCEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCCCC
PIGQISADILRTLTDGYDINLQDLELKTDWVVDIPCPPRNGPSQNLAGMVSGAPSMRSTA
CCHHHHHHHHHHHHCCCCCCEEEEEEECCEEEECCCCCCCCCCCCHHHHHCCCCCCCCEE
LLTCSYAAKPQPQTAETAEALIKLYGPSVTAEIQRLRVNAAHRVYAVFDSGIGYIQCMPE
EEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEEEEEECCCCEEEEECC
TPPVALYCEAASAESWTALSAVLNPDRVGRLTAAGYKEPGRAPNYSKSYPLTLTDAAIAA
CCCEEEEEECCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEHHHHHH
EILTLLHDVYNYTGATKLDVKTE
HHHHHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA