| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290884
Identifier: 192290884
GI number: 192290884
Start: 2699712
End: 2700620
Strand: Reverse
Name: 192290884
Synonym: Rpal_2501
Alternate gene names: NA
Gene position: 2700620-2699712 (Counterclockwise)
Preceding gene: 192290885
Following gene: 192290877
Centisome position: 47.02
GC content: 57.32
Gene sequence:
>909_bases ATGCGAATCCAATTTCCCGACCTCGCGCGACCAAAGCAGGCCGCCAAAAACCTCGTCCGCTTGTCGCCTGACCTTCGGCT CTCGGCAGTCCATGAGGCACTTGCGCACGCACTCGGCTATCGTGACTGGCACGAATTTTCGAGCAGTCACCCTTCAGGCG CTTCAACTCCCCTATTCGAAACAGATGACGCATTGCGCGTCATCCTCGGCGTTGCTGACGCCTTGGAGCTTCCAGATCCC GATGTTCAGTATGCGATTTCTAAGGCCAGCCTGCTTCAGGACCGATCAATCGACAATCAGCTGAGCCTTCGTTCAGCTAT CTGGCGCAAGCACGTCTTTGGGGCGCCTCGCCGGGGCAAACCAGGAACGATTCTCAGGAACAAAGCCTATGGGGCGAACG AGCCAGCCTATCTTCGCCAGGCTGGACGGCCAACCCATCTATTATTCGACACAGGCATGGGAATGCGCGCCGATTTCGAA GTAGCGACGCCGCTGACTCCGCTCCCGGATTTCGTGCCTTCCAGGCTCTGGCTGCCGTATGGATGCTGGACCTTGCAGGA CAACTCAGAGGTGATTTTCGCCCGCGACTATTACCCAATGTGGCGAATCGCCGAGGGGGCGGTCGAACGATTAGATCCGT GGCTCTGGATCAACGACATTGCAAACGAGGTCCACTTCGGCCAAGCGGGGACCGCCGTTTGGGCATCTGGGCTGGCACGC GAGCTTGCACTGCGTCATCTTGAAGAGCGTCGTATTTTCGAGTTGCCGAAGCTTGTCGATGTCATGCCATATCTGTTCGA GACGGACGTCCAATCGATTGCGGACGGTGTCGAGAAGCTGTGGAAACAGCGTGGTGGCAACCAAAAACCGCCGGCCTATG CCGAACTTAGCATCCGTATCACAGCATAA
Upstream 100 bases:
>100_bases AAGCTCTTGGGCAGGAAGTTTCGAATAGGCCATCTGAACTTCTTCCAGGTGCGCGGGCCTAGTGGACACGCCTTCTCATG AGCACCGCCGGAGTGGTTCT
Downstream 100 bases:
>100_bases GTAACGGCGTTCTGAGGCCCCTAGCTCACTCCCACTCAATCGTCCCCGGCGGCTTGCTCGTGACGTCGTACACCACGCGG TTGACGCCCTTGACCTCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MRIQFPDLARPKQAAKNLVRLSPDLRLSAVHEALAHALGYRDWHEFSSSHPSGASTPLFETDDALRVILGVADALELPDP DVQYAISKASLLQDRSIDNQLSLRSAIWRKHVFGAPRRGKPGTILRNKAYGANEPAYLRQAGRPTHLLFDTGMGMRADFE VATPLTPLPDFVPSRLWLPYGCWTLQDNSEVIFARDYYPMWRIAEGAVERLDPWLWINDIANEVHFGQAGTAVWASGLAR ELALRHLEERRIFELPKLVDVMPYLFETDVQSIADGVEKLWKQRGGNQKPPAYAELSIRITA
Sequences:
>Translated_302_residues MRIQFPDLARPKQAAKNLVRLSPDLRLSAVHEALAHALGYRDWHEFSSSHPSGASTPLFETDDALRVILGVADALELPDP DVQYAISKASLLQDRSIDNQLSLRSAIWRKHVFGAPRRGKPGTILRNKAYGANEPAYLRQAGRPTHLLFDTGMGMRADFE VATPLTPLPDFVPSRLWLPYGCWTLQDNSEVIFARDYYPMWRIAEGAVERLDPWLWINDIANEVHFGQAGTAVWASGLAR ELALRHLEERRIFELPKLVDVMPYLFETDVQSIADGVEKLWKQRGGNQKPPAYAELSIRITA >Mature_302_residues MRIQFPDLARPKQAAKNLVRLSPDLRLSAVHEALAHALGYRDWHEFSSSHPSGASTPLFETDDALRVILGVADALELPDP DVQYAISKASLLQDRSIDNQLSLRSAIWRKHVFGAPRRGKPGTILRNKAYGANEPAYLRQAGRPTHLLFDTGMGMRADFE VATPLTPLPDFVPSRLWLPYGCWTLQDNSEVIFARDYYPMWRIAEGAVERLDPWLWINDIANEVHFGQAGTAVWASGLAR ELALRHLEERRIFELPKLVDVMPYLFETDVQSIADGVEKLWKQRGGNQKPPAYAELSIRITA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34060; Mature: 34060
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIQFPDLARPKQAAKNLVRLSPDLRLSAVHEALAHALGYRDWHEFSSSHPSGASTPLFE CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC TDDALRVILGVADALELPDPDVQYAISKASLLQDRSIDNQLSLRSAIWRKHVFGAPRRGK CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC PGTILRNKAYGANEPAYLRQAGRPTHLLFDTGMGMRADFEVATPLTPLPDFVPSRLWLPY CCCEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCEECCCCCCCCHHHCCCCCCCC GCWTLQDNSEVIFARDYYPMWRIAEGAVERLDPWLWINDIANEVHFGQAGTAVWASGLAR CEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCHHHHHHHHHH ELALRHLEERRIFELPKLVDVMPYLFETDVQSIADGVEKLWKQRGGNQKPPAYAELSIRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE TA EC >Mature Secondary Structure MRIQFPDLARPKQAAKNLVRLSPDLRLSAVHEALAHALGYRDWHEFSSSHPSGASTPLFE CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC TDDALRVILGVADALELPDPDVQYAISKASLLQDRSIDNQLSLRSAIWRKHVFGAPRRGK CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC PGTILRNKAYGANEPAYLRQAGRPTHLLFDTGMGMRADFEVATPLTPLPDFVPSRLWLPY CCCEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCEECCCCCCCCHHHCCCCCCCC GCWTLQDNSEVIFARDYYPMWRIAEGAVERLDPWLWINDIANEVHFGQAGTAVWASGLAR CEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCHHHHHHHHHH ELALRHLEERRIFELPKLVDVMPYLFETDVQSIADGVEKLWKQRGGNQKPPAYAELSIRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE TA EC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA