| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is yaiI [C]
Identifier: 192290869
GI number: 192290869
Start: 2680606
End: 2681082
Strand: Reverse
Name: yaiI [C]
Synonym: Rpal_2485
Alternate gene names: 192290869
Gene position: 2681082-2680606 (Counterclockwise)
Preceding gene: 192290872
Following gene: 192290868
Centisome position: 46.68
GC content: 66.88
Gene sequence:
>477_bases ATGACCGACGCCCTCACCCGCATCTATGTCGACGCCGACGCCTGTCCGGTGAAGGACGAGGTGTACAAGGTGGCCGAGCG TCACCATCTTCCGGTGACGTTGGTGGCAGGCGGCTTCATCCGGGTGCCGCAGCATCCACTGATTGAGCGCGTCGCGGCCG GTTCCGGCATGGATGCGGCCGACGATTGGATTGCGGAGCGGATCAAACCGGGCGATATCGTCATCACCGCGGACATTCCG CTGGCGAGCCGCTGCGTCAAAGCGGGAGCCACCGCGATCGCTCCGAACGGCAAGCCGTTCACCGAGGAGTCGATCGGCAT GACGCTGGCGGTGCGCAATCTGATGACCGATCTGCGCTCGACCGGCGAGATCACCGGCGGCCCGCGCGCGTTTTCGCCGC GCGACCGCTCCACCTTTCTTTCGGCGCTCGATAGCGCGATCCGCAGGATCGCGCGCCGCAGGGCCGCTCCGACCTGA
Upstream 100 bases:
>100_bases GTCTCCCGGTTTGCCCGATCTTGTTGGCGATCGTTGCCGGCGATGCTACGCCACTGCGCCGGCAACGCAAGGCCGCTCCC AGAGGACTGCACACCGCCCG
Downstream 100 bases:
>100_bases TGGACCGAATATGGCGCCGCCGCTGATCCAACTGAAAGACATCGCGCTGACGTTTGGCGGCGCCGCGCTGTTCGACGGCG TCGAACTCGCCGTCTCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTDALTRIYVDADACPVKDEVYKVAERHHLPVTLVAGGFIRVPQHPLIERVAAGSGMDAADDWIAERIKPGDIVITADIP LASRCVKAGATAIAPNGKPFTEESIGMTLAVRNLMTDLRSTGEITGGPRAFSPRDRSTFLSALDSAIRRIARRRAAPT
Sequences:
>Translated_158_residues MTDALTRIYVDADACPVKDEVYKVAERHHLPVTLVAGGFIRVPQHPLIERVAAGSGMDAADDWIAERIKPGDIVITADIP LASRCVKAGATAIAPNGKPFTEESIGMTLAVRNLMTDLRSTGEITGGPRAFSPRDRSTFLSALDSAIRRIARRRAAPT >Mature_157_residues TDALTRIYVDADACPVKDEVYKVAERHHLPVTLVAGGFIRVPQHPLIERVAAGSGMDAADDWIAERIKPGDIVITADIPL ASRCVKAGATAIAPNGKPFTEESIGMTLAVRNLMTDLRSTGEITGGPRAFSPRDRSTFLSALDSAIRRIARRRAAPT
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family [H]
Homologues:
Organism=Escherichia coli, GI87081732, Length=149, Percent_Identity=41.6107382550336, Blast_Score=120, Evalue=6e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003791 [H]
Pfam domain/function: PF02639 DUF188 [H]
EC number: NA
Molecular weight: Translated: 16977; Mature: 16845
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDALTRIYVDADACPVKDEVYKVAERHHLPVTLVAGGFIRVPQHPLIERVAAGSGMDAA CCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCCCHHHHHHHCCCCCCHH DDWIAERIKPGDIVITADIPLASRCVKAGATAIAPNGKPFTEESIGMTLAVRNLMTDLRS HHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH TGEITGGPRAFSPRDRSTFLSALDSAIRRIARRRAAPT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDALTRIYVDADACPVKDEVYKVAERHHLPVTLVAGGFIRVPQHPLIERVAAGSGMDAA CCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCCCHHHHHHHCCCCCCHH DDWIAERIKPGDIVITADIPLASRCVKAGATAIAPNGKPFTEESIGMTLAVRNLMTDLRS HHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH TGEITGGPRAFSPRDRSTFLSALDSAIRRIARRRAAPT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA