| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290765
Identifier: 192290765
GI number: 192290765
Start: 2564464
End: 2565027
Strand: Reverse
Name: 192290765
Synonym: Rpal_2381
Alternate gene names: NA
Gene position: 2565027-2564464 (Counterclockwise)
Preceding gene: 192290766
Following gene: 192290764
Centisome position: 44.66
GC content: 68.09
Gene sequence:
>564_bases ATGCCGCCCACTGCGCTCCACCCCGGTGTCTCCGCCGGTTCTCAGCTGTCGCTTCGGCCGGACTCTGCCGAGATCGCAGT GCTGTCGCCCTGCGCCGCGACGCTGACGGCCTTCGCACACGCGTGGCCCGCCAAACCGAACCGGTTGCGCGCCAGCGATC TCGCCTCCTTCGCCGCACAGGCGTGCGAGCGCTCGCTCGATTCGTCGTTGTTGCGCGCAATCCTGATCGTGCTGCCGGAT CAGGCGCATCCCGACCGTGAGGCCGTCGAAGCGGTCACAGCCTTCGCCAGCAGCCAGCGGATCGCCTTCGCGGTCCTCAC CTCCGGCGAGCCGCACGAGTTTCCAAACGAACTGATCACCAACCTGCCGCCTACCACGCTCCGCCGCCTCAACAAGCTGT ACGCACAACGCGCCAGCCATGCCGCACGCGCCATCCTGATGCAGCTCGCCCTCGCCGCAGGCCTCAGCATCACCGCGATG GATGCGCAGAGCGATAACGCGACCGCCGATGCAGACCCGCACCCCTCCATTCTCCCCGAGCTGATCGAGGACGCCGCCCG ATGA
Upstream 100 bases:
>100_bases GGCGGGGTGCCCCGGGATGTCTTTCGGCGGTCCGGAGTGCAGGTCCGTTCGCCGGTTTTGAGCCATCACCCGCGATGGCC AACCGACGAGATTCGGCGCG
Downstream 100 bases:
>100_bases CCTACGCTTACGAAAAAGACGGCGACGCGATCTATCGTCAGTCGTTCTCCATTATCCGCGCCGAAGCCGCACTCGATCGG TTCACGCGTGACGAGGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MPPTALHPGVSAGSQLSLRPDSAEIAVLSPCAATLTAFAHAWPAKPNRLRASDLASFAAQACERSLDSSLLRAILIVLPD QAHPDREAVEAVTAFASSQRIAFAVLTSGEPHEFPNELITNLPPTTLRRLNKLYAQRASHAARAILMQLALAAGLSITAM DAQSDNATADADPHPSILPELIEDAAR
Sequences:
>Translated_187_residues MPPTALHPGVSAGSQLSLRPDSAEIAVLSPCAATLTAFAHAWPAKPNRLRASDLASFAAQACERSLDSSLLRAILIVLPD QAHPDREAVEAVTAFASSQRIAFAVLTSGEPHEFPNELITNLPPTTLRRLNKLYAQRASHAARAILMQLALAAGLSITAM DAQSDNATADADPHPSILPELIEDAAR >Mature_186_residues PPTALHPGVSAGSQLSLRPDSAEIAVLSPCAATLTAFAHAWPAKPNRLRASDLASFAAQACERSLDSSLLRAILIVLPDQ AHPDREAVEAVTAFASSQRIAFAVLTSGEPHEFPNELITNLPPTTLRRLNKLYAQRASHAARAILMQLALAAGLSITAMD AQSDNATADADPHPSILPELIEDAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19741; Mature: 19609
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPTALHPGVSAGSQLSLRPDSAEIAVLSPCAATLTAFAHAWPAKPNRLRASDLASFAAQ CCCCCCCCCCCCCCEEEECCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH ACERSLDSSLLRAILIVLPDQAHPDREAVEAVTAFASSQRIAFAVLTSGEPHEFPNELIT HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHH NLPPTTLRRLNKLYAQRASHAARAILMQLALAAGLSITAMDAQSDNATADADPHPSILPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHH LIEDAAR HHHHHCC >Mature Secondary Structure PPTALHPGVSAGSQLSLRPDSAEIAVLSPCAATLTAFAHAWPAKPNRLRASDLASFAAQ CCCCCCCCCCCCCEEEECCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH ACERSLDSSLLRAILIVLPDQAHPDREAVEAVTAFASSQRIAFAVLTSGEPHEFPNELIT HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHH NLPPTTLRRLNKLYAQRASHAARAILMQLALAAGLSITAMDAQSDNATADADPHPSILPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHH LIEDAAR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA