| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290712
Identifier: 192290712
GI number: 192290712
Start: 2508562
End: 2509047
Strand: Reverse
Name: 192290712
Synonym: Rpal_2324
Alternate gene names: NA
Gene position: 2509047-2508562 (Counterclockwise)
Preceding gene: 192290713
Following gene: 192290704
Centisome position: 43.68
GC content: 65.64
Gene sequence:
>486_bases GTGCCGCCGTATTTTCGCAAGAGCGGAACGAAGCGCGGGACCCGTAGACAGCTCGTCCCGTGCGTCGGGTGGGTCTCGGA CGTCGTCGAGCGCCTCGATCGCCTGTCAGATTTCGAAGGATCGCAGGGGTGGCTCTTCCCAGCCGGAGCGACCAACAAGT CTGCCAAGCCGCATGCCGAGGCCGGCCTGCTGAACGATTTTTTGACCGCGATGCCCGGCGTCGGCTGGTCGCCGCACGGG GTGCGCTATGCGTTCGCGAGCTACGTAGAGCGCGACCTCGGCTTCGCCCCGAGCGAGGCGAAGTTGATCCTTGATCATCA CGAGGGAGTCGAGCCTACGGACGTCACCGGCCTCTTCTGCTCGAGCGACCCGAAGATCGGCCGCAAGCGTGAGATGATGC GGGCATGGACGGATTGGTGCGAAGACTGGCGCGACCGCGCGATCCGCGGCCCCCGCGCTGCGCGATCGCGATCTGATGAC AACTGA
Upstream 100 bases:
>100_bases CAATGATGGCATCTTGGTACAGTCAGCGAGCGGACCGCTGCTGATGGCGCGCGATCCTCGCGCCGCCGATAACAAACCGT GATGACCGCCGGCTGTTCAC
Downstream 100 bases:
>100_bases GATCCGGCGGGCTCGGTACCGGCGCGGCGCCGCTGACAGCGAGGCGGCGTAAGATATCTGCAGCAGATTTATTACTCCGT AGATCAGTCGCCGAGCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MPPYFRKSGTKRGTRRQLVPCVGWVSDVVERLDRLSDFEGSQGWLFPAGATNKSAKPHAEAGLLNDFLTAMPGVGWSPHG VRYAFASYVERDLGFAPSEAKLILDHHEGVEPTDVTGLFCSSDPKIGRKREMMRAWTDWCEDWRDRAIRGPRAARSRSDD N
Sequences:
>Translated_161_residues MPPYFRKSGTKRGTRRQLVPCVGWVSDVVERLDRLSDFEGSQGWLFPAGATNKSAKPHAEAGLLNDFLTAMPGVGWSPHG VRYAFASYVERDLGFAPSEAKLILDHHEGVEPTDVTGLFCSSDPKIGRKREMMRAWTDWCEDWRDRAIRGPRAARSRSDD N >Mature_160_residues PPYFRKSGTKRGTRRQLVPCVGWVSDVVERLDRLSDFEGSQGWLFPAGATNKSAKPHAEAGLLNDFLTAMPGVGWSPHGV RYAFASYVERDLGFAPSEAKLILDHHEGVEPTDVTGLFCSSDPKIGRKREMMRAWTDWCEDWRDRAIRGPRAARSRSDDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18094; Mature: 17963
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPYFRKSGTKRGTRRQLVPCVGWVSDVVERLDRLSDFEGSQGWLFPAGATNKSAKPHAE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHH AGLLNDFLTAMPGVGWSPHGVRYAFASYVERDLGFAPSEAKLILDHHEGVEPTDVTGLFC HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEE SSDPKIGRKREMMRAWTDWCEDWRDRAIRGPRAARSRSDDN CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC >Mature Secondary Structure PPYFRKSGTKRGTRRQLVPCVGWVSDVVERLDRLSDFEGSQGWLFPAGATNKSAKPHAE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHH AGLLNDFLTAMPGVGWSPHGVRYAFASYVERDLGFAPSEAKLILDHHEGVEPTDVTGLFC HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEE SSDPKIGRKREMMRAWTDWCEDWRDRAIRGPRAARSRSDDN CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA