| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290680
Identifier: 192290680
GI number: 192290680
Start: 2481624
End: 2481923
Strand: Reverse
Name: 192290680
Synonym: Rpal_2292
Alternate gene names: NA
Gene position: 2481923-2481624 (Counterclockwise)
Preceding gene: 192290681
Following gene: 192290679
Centisome position: 43.21
GC content: 62.0
Gene sequence:
>300_bases ATGAACTTGCTCACCATCCTCCTCGCGCTGCTGGTGCAAACGTTGATCGCAGGCCCACTACAGAGCGAGCTCAATAGTCG GTTGGCCAAAGCCGGCGTACCAGCGGAACTCGGAGCGCAGATCAAATCGTGCCTCAGCCGGGGAGTTCCCTCGCTCGTGG AGCGAGCGTCAAATGAACCCGGATGGGCGGTCGGTATAGCTCTCGATGTGTGGCTAAAACGAACGCCGCCCGAGCGCGTC CTGGACCAAGCGTCCCCCAACTGCCGGCCGGCGATCGATGCGGCACGTCCGTACTTCTAG
Upstream 100 bases:
>100_bases CGGCTCGGGGCCCGATGCCTGAACACTTCTTACGCCGCGCTTCGGCTGCCACGTGCTGGTCGGCTTCGGCTCCTTACGAC AGCGATCAGAAGAGTCCCAC
Downstream 100 bases:
>100_bases GCCCTCGCCGACCCTCCGACGCTTCCTTTTCCCGACGTTGTGATTACGCGACGACCGGTGCGTCGCTTGGCCTTTGAGCC TCAGAACGAAGAGATGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MNLLTILLALLVQTLIAGPLQSELNSRLAKAGVPAELGAQIKSCLSRGVPSLVERASNEPGWAVGIALDVWLKRTPPERV LDQASPNCRPAIDAARPYF
Sequences:
>Translated_99_residues MNLLTILLALLVQTLIAGPLQSELNSRLAKAGVPAELGAQIKSCLSRGVPSLVERASNEPGWAVGIALDVWLKRTPPERV LDQASPNCRPAIDAARPYF >Mature_99_residues MNLLTILLALLVQTLIAGPLQSELNSRLAKAGVPAELGAQIKSCLSRGVPSLVERASNEPGWAVGIALDVWLKRTPPERV LDQASPNCRPAIDAARPYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10600; Mature: 10600
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLTILLALLVQTLIAGPLQSELNSRLAKAGVPAELGAQIKSCLSRGVPSLVERASNEP CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCC GWAVGIALDVWLKRTPPERVLDQASPNCRPAIDAARPYF CEEHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNLLTILLALLVQTLIAGPLQSELNSRLAKAGVPAELGAQIKSCLSRGVPSLVERASNEP CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCC GWAVGIALDVWLKRTPPERVLDQASPNCRPAIDAARPYF CEEHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA