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The map label for this gene is apl [H]

Identifier: 192290679

GI number: 192290679

Start: 2480914

End: 2481522

Strand: Reverse

Name: apl [H]

Synonym: Rpal_2291

Alternate gene names: 192290679

Gene position: 2481522-2480914 (Counterclockwise)

Preceding gene: 192290680

Following gene: 192290678

Centisome position: 43.2

GC content: 56.98

Gene sequence:

>609_bases
ATGTTCGACTGGATCGTGAGTGGAATAGAAAAGGCGGGAGCCGTCGGCGTCTTCCTTCTAATGCTCGCCGAGAACATCTT
CCCCCCAATTCCGTCCGAGGTTGTCATGCCGCTTGCCGGCTACGTAGCTTCTCGCGGAGATTTGGACATCTACGCCGTCG
TCTTCGCGGGAACGCTAGGATCTCTCATCGGGACGACCGTTTGGTACTACGCCGGCCGCACGTTGGGCTCCGAACGTCTC
CGGATCTTCGCAATCAGACATGGTCGATGGCTCACCATGACACCGGAGGAAATCGATCGCGCAGCCGTGTGGTTCGACCG
ATATGGTACCTGGGCGGTGTTCTTGGGACGGTTGATTCCAGGCGTTCGCACGCTGATTTCGTTACCAGCGGGCATCACGG
GAATGCCCATCTTGAGGTTCATCTCCTACTCGGCAGTAGGGACCGCGCTATGGACGGCAGCCCTTGCTATTGCAGGCTAT
GGGATGGGACAGAACTACGCCCTGATCGGACGTTTTGTTGAGCCAGTTTCGAACTGGCTATTGATACTTGCGGCAGCCGT
ATACGCTTATCGCGTTGTGACCTTCGGACATAAACGGGACCGTCGATGA

Upstream 100 bases:

>100_bases
CCCTCGCCGACCCTCCGACGCTTCCTTTTCCCGACGTTGTGATTACGCGACGACCGGTGCGTCGCTTGGCCTTTGAGCCT
CAGAACGAAGAGATGACGTA

Downstream 100 bases:

>100_bases
TCGGCGTCGCGCCCTCAGGACCCAACGGCCGCCGTGATCGATGGACGCTCGATGTCTCCCGCAGCCGTTCAAACGAACCA
GTTCGTCGAACGGCGAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MFDWIVSGIEKAGAVGVFLLMLAENIFPPIPSEVVMPLAGYVASRGDLDIYAVVFAGTLGSLIGTTVWYYAGRTLGSERL
RIFAIRHGRWLTMTPEEIDRAAVWFDRYGTWAVFLGRLIPGVRTLISLPAGITGMPILRFISYSAVGTALWTAALAIAGY
GMGQNYALIGRFVEPVSNWLLILAAAVYAYRVVTFGHKRDRR

Sequences:

>Translated_202_residues
MFDWIVSGIEKAGAVGVFLLMLAENIFPPIPSEVVMPLAGYVASRGDLDIYAVVFAGTLGSLIGTTVWYYAGRTLGSERL
RIFAIRHGRWLTMTPEEIDRAAVWFDRYGTWAVFLGRLIPGVRTLISLPAGITGMPILRFISYSAVGTALWTAALAIAGY
GMGQNYALIGRFVEPVSNWLLILAAAVYAYRVVTFGHKRDRR
>Mature_202_residues
MFDWIVSGIEKAGAVGVFLLMLAENIFPPIPSEVVMPLAGYVASRGDLDIYAVVFAGTLGSLIGTTVWYYAGRTLGSERL
RIFAIRHGRWLTMTPEEIDRAAVWFDRYGTWAVFLGRLIPGVRTLISLPAGITGMPILRFISYSAVGTALWTAALAIAGY
GMGQNYALIGRFVEPVSNWLLILAAAVYAYRVVTFGHKRDRR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1789384, Length=167, Percent_Identity=28.7425149700599, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1788656, Length=152, Percent_Identity=25.6578947368421, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22223; Mature: 22223

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDWIVSGIEKAGAVGVFLLMLAENIFPPIPSEVVMPLAGYVASRGDLDIYAVVFAGTLG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SLIGTTVWYYAGRTLGSERLRIFAIRHGRWLTMTPEEIDRAAVWFDRYGTWAVFLGRLIP
HHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHH
GVRTLISLPAGITGMPILRFISYSAVGTALWTAALAIAGYGMGQNYALIGRFVEPVSNWL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LILAAAVYAYRVVTFGHKRDRR
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFDWIVSGIEKAGAVGVFLLMLAENIFPPIPSEVVMPLAGYVASRGDLDIYAVVFAGTLG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SLIGTTVWYYAGRTLGSERLRIFAIRHGRWLTMTPEEIDRAAVWFDRYGTWAVFLGRLIP
HHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHH
GVRTLISLPAGITGMPILRFISYSAVGTALWTAALAIAGYGMGQNYALIGRFVEPVSNWL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LILAAAVYAYRVVTFGHKRDRR
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]