BacMap

Definition	Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession	NC_011004
Length	5,744,041

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The map label for this gene is qor [C]

Identifier: 192290620

GI number: 192290620

Start: 2419070

End: 2420092

Strand: Reverse

Name: qor [C]

Synonym: Rpal_2229

Alternate gene names: 192290620

Gene position: 2420092-2419070 (Counterclockwise)

Preceding gene: 192290621

Following gene: 192290619

Centisome position: 42.13

GC content: 65.0

Gene sequence:

>1023_bases
ATGCGCGCGCTCACCCTCGTTGCCGACCGCAATCTCGTGGTCGCCGACCTGCCGTCTCCCCCGTCCCCGGCGGCCGGCGA
GGTGCAGGTCCGCATCGCCGCAGTGGCGCTGAACCACATCGACGTGTGGGGCTATCGCGGCATGGCCTTCGTCAAGCGCA
AGCTGCCGATCGTGGTCGGCGCCGAAGCCTCCGGCACGATCGAAGCGGTCGGCGACGGCGTCACCACCTTTAAGCCCGGC
CAGAAGGTCGTGATGTACGGCGCGCTGACCTGCGGCCACTGCAAGGCGTGCCAGGAAGGCCGCGACAATCTCTGCGAAAA
CGTCGGCGGCCTGATCGGCTTCCATGTCGACGGCTTCGCGCGCGAGCTGATGAACATCGCGGCGCGGCTTGTGATCCCGG
TGCCGGACGCCGTCGACCTGCGCGATGCCGCCTGCGCGCCGATCGCCTTCTCGACCGTGCAGCACATGCTGTTCGACAAT
GCCAAGCTGCAGCCCGGCGAGACCGTGCTCGTCCATGCCGGCGGCTCCGGCATCGGCACTGTAGCGATCATGATGGCCAA
GGCGATCGGCTGCACGGTGATCACCACCGTCGGCGATGATTCCAAGATCGAGGGCGTCAAGAAGCTCGGCGCCGATCACG
TCATCAACTATCGCCAGGATCGCTTCGAGCACGAGTGCCGCAAGATCACCAAGAAGAAGGGTGTCGACGTGGTGTTCGAA
CACGTCGGTGCCGACACTTTCAACGGCTCGCTGCTCAGCTTGAAGCGCGGCGGCCGGCTGGTGACCTGCGGCTCGACCTC
GGGCCCGACCACCACCCTTAACCTGATGCAGCTGTTCCAGCAGCAGTACAAGATCTTCGGCTCGTTCGGCGCGACGATGA
AGAACATCGCCGAAAGCCTCGATAAGATGGCTGCCGGGATGCTGCCGGTGATCGACACCGAAGTGCCGCTCGACGATGTC
GGTGCGGCGCTGAAGCGTATGGAAAGCCGCCAGGTGTTCGGCAAGATCATCGTCCGGTTCTGA

Upstream 100 bases:

>100_bases
CTAATTGCCCGTGAATCGCAGCTCCGGCCGCCGCGGTTGACGCAGCGGCCTCCAGCGGCGATACGCAGGGCGCAAGCCTC
CAACCGTTCGGACGATACCC

Downstream 100 bases:

>100_bases
TGAAGGTCACCCTGTATCGCGCCAAGCTGCGCGCCCAGCGTGCGGCCAAGGGCCTTGTCGGCAAGATCGTCGGCCCGGTG
GCGATCGGGGCGTTGCATCT

Product: alcohol dehydrogenase zinc-binding domain-containing protein

Products: NA

Alternate protein names: ADH-HT [H]

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MRALTLVADRNLVVADLPSPPSPAAGEVQVRIAAVALNHIDVWGYRGMAFVKRKLPIVVGAEASGTIEAVGDGVTTFKPG
QKVVMYGALTCGHCKACQEGRDNLCENVGGLIGFHVDGFARELMNIAARLVIPVPDAVDLRDAACAPIAFSTVQHMLFDN
AKLQPGETVLVHAGGSGIGTVAIMMAKAIGCTVITTVGDDSKIEGVKKLGADHVINYRQDRFEHECRKITKKKGVDVVFE
HVGADTFNGSLLSLKRGGRLVTCGSTSGPTTTLNLMQLFQQQYKIFGSFGATMKNIAESLDKMAAGMLPVIDTEVPLDDV
GAALKRMESRQVFGKIIVRF

Sequences:

>Translated_340_residues
MRALTLVADRNLVVADLPSPPSPAAGEVQVRIAAVALNHIDVWGYRGMAFVKRKLPIVVGAEASGTIEAVGDGVTTFKPG
QKVVMYGALTCGHCKACQEGRDNLCENVGGLIGFHVDGFARELMNIAARLVIPVPDAVDLRDAACAPIAFSTVQHMLFDN
AKLQPGETVLVHAGGSGIGTVAIMMAKAIGCTVITTVGDDSKIEGVKKLGADHVINYRQDRFEHECRKITKKKGVDVVFE
HVGADTFNGSLLSLKRGGRLVTCGSTSGPTTTLNLMQLFQQQYKIFGSFGATMKNIAESLDKMAAGMLPVIDTEVPLDDV
GAALKRMESRQVFGKIIVRF
>Mature_340_residues
MRALTLVADRNLVVADLPSPPSPAAGEVQVRIAAVALNHIDVWGYRGMAFVKRKLPIVVGAEASGTIEAVGDGVTTFKPG
QKVVMYGALTCGHCKACQEGRDNLCENVGGLIGFHVDGFARELMNIAARLVIPVPDAVDLRDAACAPIAFSTVQHMLFDN
AKLQPGETVLVHAGGSGIGTVAIMMAKAIGCTVITTVGDDSKIEGVKKLGADHVINYRQDRFEHECRKITKKKGVDVVFE
HVGADTFNGSLLSLKRGGRLVTCGSTSGPTTTLNLMQLFQQQYKIFGSFGATMKNIAESLDKMAAGMLPVIDTEVPLDDV
GAALKRMESRQVFGKIIVRF

Specific function: Thermophilic NAD(+)-dependent alcohol dehydrogenase. Bears mainly an ethanol-dehydrogenase activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI22538446, Length=346, Percent_Identity=26.0115606936416, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI22538444, Length=346, Percent_Identity=26.0115606936416, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI194239674, Length=310, Percent_Identity=25.8064516129032, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI13236495, Length=310, Percent_Identity=25.8064516129032, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI18379349, Length=338, Percent_Identity=25.7396449704142, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI24308257, Length=347, Percent_Identity=24.4956772334294, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI34577061, Length=254, Percent_Identity=32.6771653543307, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI4501929, Length=254, Percent_Identity=33.0708661417323, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI41872631, Length=169, Percent_Identity=31.3609467455621, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI67078404, Length=316, Percent_Identity=26.5822784810127, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI4501933, Length=315, Percent_Identity=29.5238095238095, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI156627571, Length=323, Percent_Identity=27.2445820433437, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI71565152, Length=246, Percent_Identity=29.2682926829268, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI67078406, Length=309, Percent_Identity=26.537216828479, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI71565154, Length=265, Percent_Identity=29.0566037735849, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI197927207, Length=174, Percent_Identity=28.735632183908, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI71743840, Length=217, Percent_Identity=30.4147465437788, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI262073058, Length=217, Percent_Identity=30.4147465437788, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI226059159, Length=140, Percent_Identity=32.1428571428571, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI226059133, Length=140, Percent_Identity=32.1428571428571, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI226056130, Length=140, Percent_Identity=32.1428571428571, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI28557745, Length=255, Percent_Identity=26.2745098039216, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1790485, Length=332, Percent_Identity=30.1204819277108, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI1790045, Length=352, Percent_Identity=28.125, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788073, Length=279, Percent_Identity=29.0322580645161, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI87081918, Length=345, Percent_Identity=24.9275362318841, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787863, Length=201, Percent_Identity=31.8407960199005, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1786518, Length=338, Percent_Identity=25.7396449704142, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI226510992, Length=292, Percent_Identity=27.3972602739726, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790718, Length=283, Percent_Identity=27.9151943462898, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788075, Length=311, Percent_Identity=26.0450160771704, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87082125, Length=295, Percent_Identity=27.1186440677966, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562876, Length=251, Percent_Identity=29.8804780876494, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71988145, Length=333, Percent_Identity=25.2252252252252, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17562584, Length=325, Percent_Identity=24.6153846153846, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25146526, Length=235, Percent_Identity=29.7872340425532, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562878, Length=217, Percent_Identity=29.9539170506912, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17562582, Length=323, Percent_Identity=25.077399380805, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71997431, Length=219, Percent_Identity=29.2237442922374, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17565904, Length=238, Percent_Identity=28.9915966386555, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI212642053, Length=224, Percent_Identity=27.6785714285714, Blast_Score=66, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6319520, Length=341, Percent_Identity=25.5131964809384, Blast_Score=91, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6324486, Length=330, Percent_Identity=23.9393939393939, Blast_Score=89, Evalue=7e-19,
Organism=Saccharomyces cerevisiae, GI6323961, Length=325, Percent_Identity=24, Blast_Score=88, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6319621, Length=321, Percent_Identity=24.2990654205607, Blast_Score=85, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6322619, Length=328, Percent_Identity=25, Blast_Score=81, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6319955, Length=328, Percent_Identity=24.6951219512195, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6323729, Length=325, Percent_Identity=22.7692307692308, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6320033, Length=243, Percent_Identity=27.9835390946502, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6319258, Length=346, Percent_Identity=25.1445086705202, Blast_Score=69, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6323099, Length=261, Percent_Identity=25.2873563218391, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI19920632, Length=227, Percent_Identity=27.7533039647577, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI221330659, Length=142, Percent_Identity=32.3943661971831, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24581345, Length=224, Percent_Identity=26.3392857142857, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17737895, Length=106, Percent_Identity=36.7924528301887, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17737897, Length=245, Percent_Identity=26.530612244898, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17137530, Length=179, Percent_Identity=26.8156424581006, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR002328
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: =1.1.1.1 [H]

Molecular weight: Translated: 36238; Mature: 36238

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALTLVADRNLVVADLPSPPSPAAGEVQVRIAAVALNHIDVWGYRGMAFVKRKLPIVVG
CCEEEEEECCCEEEEECCCCCCCCCCCEEEEEEEEEEHHHEECCCCCHHHHHHCCCEEEE
AEASGTIEAVGDGVTTFKPGQKVVMYGALTCGHCKACQEGRDNLCENVGGLIGFHVDGFA
CCCCCCCEECCCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEECHHHHH
RELMNIAARLVIPVPDAVDLRDAACAPIAFSTVQHMLFDNAKLQPGETVLVHAGGSGIGT
HHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHH
VAIMMAKAIGCTVITTVGDDSKIEGVKKLGADHVINYRQDRFEHECRKITKKKGVDVVFE
HHHHHHHHCCCEEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
HVGADTFNGSLLSLKRGGRLVTCGSTSGPTTTLNLMQLFQQQYKIFGSFGATMKNIAESL
HCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKMAAGMLPVIDTEVPLDDVGAALKRMESRQVFGKIIVRF
HHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRALTLVADRNLVVADLPSPPSPAAGEVQVRIAAVALNHIDVWGYRGMAFVKRKLPIVVG
CCEEEEEECCCEEEEECCCCCCCCCCCEEEEEEEEEEHHHEECCCCCHHHHHHCCCEEEE
AEASGTIEAVGDGVTTFKPGQKVVMYGALTCGHCKACQEGRDNLCENVGGLIGFHVDGFA
CCCCCCCEECCCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEECHHHHH
RELMNIAARLVIPVPDAVDLRDAACAPIAFSTVQHMLFDNAKLQPGETVLVHAGGSGIGT
HHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHH
VAIMMAKAIGCTVITTVGDDSKIEGVKKLGADHVINYRQDRFEHECRKITKKKGVDVVFE
HHHHHHHHCCCEEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
HVGADTFNGSLLSLKRGGRLVTCGSTSGPTTTLNLMQLFQQQYKIFGSFGATMKNIAESL
HCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKMAAGMLPVIDTEVPLDDVGAALKRMESRQVFGKIIVRF
HHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8020473 [H]