| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290583
Identifier: 192290583
GI number: 192290583
Start: 2375683
End: 2376132
Strand: Reverse
Name: 192290583
Synonym: Rpal_2192
Alternate gene names: NA
Gene position: 2376132-2375683 (Counterclockwise)
Preceding gene: 192290584
Following gene: 192290582
Centisome position: 41.37
GC content: 69.56
Gene sequence:
>450_bases ATGCGTCATCTTGTTGTCATCGCCCTGGCAGGGCTCTCGCTGGGGGGCTGCGCGTCGATGTCCGACGCCTTCAAGTCGAC CCCGCCCGACGTCACTGTTCAGCTCGATTCGGTGCCGCCGGGTGCGGACGCCGTCGCCTCCACCGGGCAGAGCTGTAAGA CCCCCTGCTCGATCAAAGTGCCGCCGGCGGATTTCACCGTGACCTTCTCGCTGGACAAGTTCCAGACCACGACGGTTCCG GTGCAGGTCTCGGTCGCGCCCGGCAGCTTCATGTCGGAAGGCACCACGACGGTGACGCCGAATCCGGTGACCGCCGAGTT GCAGTCCGCCAAGCCGTCGCGCAAGGCACGCCAAGTCCGCAAGCCGCGCAAGCCGAAGCCCGCCGCTGCGGCGCCGGCCG CCGACGCTCCGGCCGCGGGCTCGCCGTTCCCTGCTCCGGCAGCGCGCTGA
Upstream 100 bases:
>100_bases CTCTTAAGTTTGTTGGACGCGCAGTTGCCAGCGTTCCGGCAGGCTCCTATGGTCCGCGCGGGACTGTGGCCGTTGGCCGC ACTGAACGGATGGGAGTATC
Downstream 100 bases:
>100_bases CATATTGCAGCGCATCACGGCGCGTGATTGTGCGCGCCGCTGATCGTGCCTAGATAGTGCGGAGACATTAGCCGCGACTG GCGGCGACCGCGACAGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MRHLVVIALAGLSLGGCASMSDAFKSTPPDVTVQLDSVPPGADAVASTGQSCKTPCSIKVPPADFTVTFSLDKFQTTTVP VQVSVAPGSFMSEGTTTVTPNPVTAELQSAKPSRKARQVRKPRKPKPAAAAPAADAPAAGSPFPAPAAR
Sequences:
>Translated_149_residues MRHLVVIALAGLSLGGCASMSDAFKSTPPDVTVQLDSVPPGADAVASTGQSCKTPCSIKVPPADFTVTFSLDKFQTTTVP VQVSVAPGSFMSEGTTTVTPNPVTAELQSAKPSRKARQVRKPRKPKPAAAAPAADAPAAGSPFPAPAAR >Mature_149_residues MRHLVVIALAGLSLGGCASMSDAFKSTPPDVTVQLDSVPPGADAVASTGQSCKTPCSIKVPPADFTVTFSLDKFQTTTVP VQVSVAPGSFMSEGTTTVTPNPVTAELQSAKPSRKARQVRKPRKPKPAAAAPAADAPAAGSPFPAPAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15110; Mature: 15110
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHLVVIALAGLSLGGCASMSDAFKSTPPDVTVQLDSVPPGADAVASTGQSCKTPCSIKV CCEEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEEE PPADFTVTFSLDKFQTTTVPVQVSVAPGSFMSEGTTTVTPNPVTAELQSAKPSRKARQVR CCCCEEEEEEECCEEEEEEEEEEEECCCCCCCCCCEEECCCCCEEEECCCCCCHHHHHHH KPRKPKPAAAAPAADAPAAGSPFPAPAAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRHLVVIALAGLSLGGCASMSDAFKSTPPDVTVQLDSVPPGADAVASTGQSCKTPCSIKV CCEEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEEE PPADFTVTFSLDKFQTTTVPVQVSVAPGSFMSEGTTTVTPNPVTAELQSAKPSRKARQVR CCCCEEEEEEECCEEEEEEEEEEEECCCCCCCCCCEEECCCCCEEEECCCCCCHHHHHHH KPRKPKPAAAAPAADAPAAGSPFPAPAAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA