| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290558
Identifier: 192290558
GI number: 192290558
Start: 2345311
End: 2346834
Strand: Reverse
Name: 192290558
Synonym: Rpal_2167
Alternate gene names: NA
Gene position: 2346834-2345311 (Counterclockwise)
Preceding gene: 192290559
Following gene: 192290557
Centisome position: 40.86
GC content: 69.16
Gene sequence:
>1524_bases ATGACCGTTGCGATCGAAATGGGGCAAACCAATTCAGGCGCAACCGCGGCTCTCGATCTCGAGGAACTGCTGGCGACGCG GCTTTTGGTGCAGGGCAATTCGGGCTCGGGCAAGTCGCATCTGCTGCGCCGCCTGCTGGAGCAGAGCGCGCCCTGGGTGC AGCAGTCGATCATCGATCCCGAGGGCGACTTCGTCACGCTGGCCGAACGCTTCGGCCATCTCGTGATCGATGCCGAAGAC CACACCGAGCGCGGCCTGCAGGTCGCCGGCGAGCGTGCCCGCATCCATCGCGTCTCCACTGTGCTCAATCTCGAAGGACT GGACGCCGAGAACCAGATGCGCCGCGCCGCGGCGTTTCTCGACGGCATGTTCAACACCGCGCGCGACCATTGGTATCCGA TGTTGGTGGTGGTCGACGAAGCGCAGCTGTTCGCGCCCGCTGTCGCCGGCGAAGTGTCGGACGAAGCACGCAAGCTGTCG CTCGGCGCGATGACCAATCTGATGTGCCGCGGCCGCAAGCGCGGCCTCGCCGGCGTGATCGCCACCCAGCGACTCGCCAA GCTCGCCAAGAACGTCGCGGCCGAAGCGTCGAACTTCCTGATGGGCCGCACCTTCCTCGACATCGACATGGCGCGCGCCG CCGATCTGCTCGGCATGGAGCGGCGGCAGGCCGAAGCGTTTCGTGATCTCGAGCGCGGCCAGTTCATGGCGCTCGGCCCG GCGCTGTCGCGCCGGCCGCTCGGCCTGCGGATCGGGCCGACCGAAACGCATCCGCGCAACTCCACGCCGCGCCTGATGCC GCTGCCGGAAGCGGGCCTGGAAGATGCGCGCGCCGTGATCCTCGCCGCGCCGCCGCCGGAGACGACGGCGACCCGGCCGC AGCGTCGTGCGCCGGCACCCGATCTGCTTAGCCAGTTGATGGCGGCGAAGTCGGTCGCGATCGACACCACGCCGGAGCCC GAGGCGCCGCCGCTCAGCGACGAGCAGATCGCCGAGCGCCGCGAGCGGCTCGATCGCATCCTGCGCGCGATCCTGGCCGA GCCGGATGCCGGCTTCCGCGCCATCGGCGTGCTGTATCAGGAGTTCGTGGTGCGCTGCCGGATCGAAGGCCTCGCGACGA CGATTCCGGATATGACCGAGTTTCGCCGGATGCTGACGCATGCCCGCGCCGGCCTCACCACCGAGATGGCTGCCGACGAT GCCTGGCAGGACGTGACGCTCCGCGCCTCCACCCTGCCCGACGACATGCAGGGCGTGTTCATGATCATCGCGCGCGCCGC CAAAGAGGGCTGGCCCTGCCCGGGTGATGCCGCAATCGCCCGCGCCTACGGCACGCACTCGCTGCGCCGTGCCCGCCGGC TCCTCACCTACATCGAAGAACAGGGGCTGATTGTCTGCCAGTTCGACGGCGCTGGCCGCCGTACCGTGACGCTGGTCGAA CTCGCCTGGGCCACCGCGCCCGGCGATCCCAACGCGCCCGACGATCTGCCGATCGAAGACGATTGCCGCGCCGCATCGGC GTGA
Upstream 100 bases:
>100_bases TGTGCGTGCATAACACCGAACGGAACCGCCGCAGGTGCTCGACGCGGCGCGCCCAGGTTGTTAAGCCCCCTGCTCGCGAA AGGAGACCTCGGGCCGAGCC
Downstream 100 bases:
>100_bases GCCCCGTCGCCTCACCAGCCTAGAAAACGGTTCAAGTCGGCGCGCCGATTTGCGATACGAGAGGCAATCGCAGTTTTGCC GATGCCAGGAGGATCGCCAT
Product: ATPase AAA
Products: NA
Alternate protein names: AAA ATPase; ATPase-Like Protein; GMP Reductase
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MTVAIEMGQTNSGATAALDLEELLATRLLVQGNSGSGKSHLLRRLLEQSAPWVQQSIIDPEGDFVTLAERFGHLVIDAED HTERGLQVAGERARIHRVSTVLNLEGLDAENQMRRAAAFLDGMFNTARDHWYPMLVVVDEAQLFAPAVAGEVSDEARKLS LGAMTNLMCRGRKRGLAGVIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEAFRDLERGQFMALGP ALSRRPLGLRIGPTETHPRNSTPRLMPLPEAGLEDARAVILAAPPPETTATRPQRRAPAPDLLSQLMAAKSVAIDTTPEP EAPPLSDEQIAERRERLDRILRAILAEPDAGFRAIGVLYQEFVVRCRIEGLATTIPDMTEFRRMLTHARAGLTTEMAADD AWQDVTLRASTLPDDMQGVFMIIARAAKEGWPCPGDAAIARAYGTHSLRRARRLLTYIEEQGLIVCQFDGAGRRTVTLVE LAWATAPGDPNAPDDLPIEDDCRAASA
Sequences:
>Translated_507_residues MTVAIEMGQTNSGATAALDLEELLATRLLVQGNSGSGKSHLLRRLLEQSAPWVQQSIIDPEGDFVTLAERFGHLVIDAED HTERGLQVAGERARIHRVSTVLNLEGLDAENQMRRAAAFLDGMFNTARDHWYPMLVVVDEAQLFAPAVAGEVSDEARKLS LGAMTNLMCRGRKRGLAGVIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEAFRDLERGQFMALGP ALSRRPLGLRIGPTETHPRNSTPRLMPLPEAGLEDARAVILAAPPPETTATRPQRRAPAPDLLSQLMAAKSVAIDTTPEP EAPPLSDEQIAERRERLDRILRAILAEPDAGFRAIGVLYQEFVVRCRIEGLATTIPDMTEFRRMLTHARAGLTTEMAADD AWQDVTLRASTLPDDMQGVFMIIARAAKEGWPCPGDAAIARAYGTHSLRRARRLLTYIEEQGLIVCQFDGAGRRTVTLVE LAWATAPGDPNAPDDLPIEDDCRAASA >Mature_506_residues TVAIEMGQTNSGATAALDLEELLATRLLVQGNSGSGKSHLLRRLLEQSAPWVQQSIIDPEGDFVTLAERFGHLVIDAEDH TERGLQVAGERARIHRVSTVLNLEGLDAENQMRRAAAFLDGMFNTARDHWYPMLVVVDEAQLFAPAVAGEVSDEARKLSL GAMTNLMCRGRKRGLAGVIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEAFRDLERGQFMALGPA LSRRPLGLRIGPTETHPRNSTPRLMPLPEAGLEDARAVILAAPPPETTATRPQRRAPAPDLLSQLMAAKSVAIDTTPEPE APPLSDEQIAERRERLDRILRAILAEPDAGFRAIGVLYQEFVVRCRIEGLATTIPDMTEFRRMLTHARAGLTTEMAADDA WQDVTLRASTLPDDMQGVFMIIARAAKEGWPCPGDAAIARAYGTHSLRRARRLLTYIEEQGLIVCQFDGAGRRTVTLVEL AWATAPGDPNAPDDLPIEDDCRAASA
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55382; Mature: 55251
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVAIEMGQTNSGATAALDLEELLATRLLVQGNSGSGKSHLLRRLLEQSAPWVQQSIIDP CEEEEEECCCCCCCEEEECHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHCCCC EGDFVTLAERFGHLVIDAEDHTERGLQVAGERARIHRVSTVLNLEGLDAENQMRRAAAFL CCCEEEHHHHHCCEEEECCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH DGMFNTARDHWYPMLVVVDEAQLFAPAVAGEVSDEARKLSLGAMTNLMCRGRKRGLAGVI HHHHHHHHHCCEEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH ATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEAFRDLERGQFMALGP HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC ALSRRPLGLRIGPTETHPRNSTPRLMPLPEAGLEDARAVILAAPPPETTATRPQRRAPAP CCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCH DLLSQLMAAKSVAIDTTPEPEAPPLSDEQIAERRERLDRILRAILAEPDAGFRAIGVLYQ HHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH EFVVRCRIEGLATTIPDMTEFRRMLTHARAGLTTEMAADDAWQDVTLRASTLPDDMQGVF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEECCCCCHHHHHH MIIARAAKEGWPCPGDAAIARAYGTHSLRRARRLLTYIEEQGLIVCQFDGAGRRTVTLVE HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEE LAWATAPGDPNAPDDLPIEDDCRAASA EEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TVAIEMGQTNSGATAALDLEELLATRLLVQGNSGSGKSHLLRRLLEQSAPWVQQSIIDP EEEEEECCCCCCCEEEECHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHCCCC EGDFVTLAERFGHLVIDAEDHTERGLQVAGERARIHRVSTVLNLEGLDAENQMRRAAAFL CCCEEEHHHHHCCEEEECCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH DGMFNTARDHWYPMLVVVDEAQLFAPAVAGEVSDEARKLSLGAMTNLMCRGRKRGLAGVI HHHHHHHHHCCEEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH ATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEAFRDLERGQFMALGP HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC ALSRRPLGLRIGPTETHPRNSTPRLMPLPEAGLEDARAVILAAPPPETTATRPQRRAPAP CCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCH DLLSQLMAAKSVAIDTTPEPEAPPLSDEQIAERRERLDRILRAILAEPDAGFRAIGVLYQ HHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH EFVVRCRIEGLATTIPDMTEFRRMLTHARAGLTTEMAADDAWQDVTLRASTLPDDMQGVF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEECCCCCHHHHHH MIIARAAKEGWPCPGDAAIARAYGTHSLRRARRLLTYIEEQGLIVCQFDGAGRRTVTLVE HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEE LAWATAPGDPNAPDDLPIEDDCRAASA EEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA