Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is 192290558

Identifier: 192290558

GI number: 192290558

Start: 2345311

End: 2346834

Strand: Reverse

Name: 192290558

Synonym: Rpal_2167

Alternate gene names: NA

Gene position: 2346834-2345311 (Counterclockwise)

Preceding gene: 192290559

Following gene: 192290557

Centisome position: 40.86

GC content: 69.16

Gene sequence:

>1524_bases
ATGACCGTTGCGATCGAAATGGGGCAAACCAATTCAGGCGCAACCGCGGCTCTCGATCTCGAGGAACTGCTGGCGACGCG
GCTTTTGGTGCAGGGCAATTCGGGCTCGGGCAAGTCGCATCTGCTGCGCCGCCTGCTGGAGCAGAGCGCGCCCTGGGTGC
AGCAGTCGATCATCGATCCCGAGGGCGACTTCGTCACGCTGGCCGAACGCTTCGGCCATCTCGTGATCGATGCCGAAGAC
CACACCGAGCGCGGCCTGCAGGTCGCCGGCGAGCGTGCCCGCATCCATCGCGTCTCCACTGTGCTCAATCTCGAAGGACT
GGACGCCGAGAACCAGATGCGCCGCGCCGCGGCGTTTCTCGACGGCATGTTCAACACCGCGCGCGACCATTGGTATCCGA
TGTTGGTGGTGGTCGACGAAGCGCAGCTGTTCGCGCCCGCTGTCGCCGGCGAAGTGTCGGACGAAGCACGCAAGCTGTCG
CTCGGCGCGATGACCAATCTGATGTGCCGCGGCCGCAAGCGCGGCCTCGCCGGCGTGATCGCCACCCAGCGACTCGCCAA
GCTCGCCAAGAACGTCGCGGCCGAAGCGTCGAACTTCCTGATGGGCCGCACCTTCCTCGACATCGACATGGCGCGCGCCG
CCGATCTGCTCGGCATGGAGCGGCGGCAGGCCGAAGCGTTTCGTGATCTCGAGCGCGGCCAGTTCATGGCGCTCGGCCCG
GCGCTGTCGCGCCGGCCGCTCGGCCTGCGGATCGGGCCGACCGAAACGCATCCGCGCAACTCCACGCCGCGCCTGATGCC
GCTGCCGGAAGCGGGCCTGGAAGATGCGCGCGCCGTGATCCTCGCCGCGCCGCCGCCGGAGACGACGGCGACCCGGCCGC
AGCGTCGTGCGCCGGCACCCGATCTGCTTAGCCAGTTGATGGCGGCGAAGTCGGTCGCGATCGACACCACGCCGGAGCCC
GAGGCGCCGCCGCTCAGCGACGAGCAGATCGCCGAGCGCCGCGAGCGGCTCGATCGCATCCTGCGCGCGATCCTGGCCGA
GCCGGATGCCGGCTTCCGCGCCATCGGCGTGCTGTATCAGGAGTTCGTGGTGCGCTGCCGGATCGAAGGCCTCGCGACGA
CGATTCCGGATATGACCGAGTTTCGCCGGATGCTGACGCATGCCCGCGCCGGCCTCACCACCGAGATGGCTGCCGACGAT
GCCTGGCAGGACGTGACGCTCCGCGCCTCCACCCTGCCCGACGACATGCAGGGCGTGTTCATGATCATCGCGCGCGCCGC
CAAAGAGGGCTGGCCCTGCCCGGGTGATGCCGCAATCGCCCGCGCCTACGGCACGCACTCGCTGCGCCGTGCCCGCCGGC
TCCTCACCTACATCGAAGAACAGGGGCTGATTGTCTGCCAGTTCGACGGCGCTGGCCGCCGTACCGTGACGCTGGTCGAA
CTCGCCTGGGCCACCGCGCCCGGCGATCCCAACGCGCCCGACGATCTGCCGATCGAAGACGATTGCCGCGCCGCATCGGC
GTGA

Upstream 100 bases:

>100_bases
TGTGCGTGCATAACACCGAACGGAACCGCCGCAGGTGCTCGACGCGGCGCGCCCAGGTTGTTAAGCCCCCTGCTCGCGAA
AGGAGACCTCGGGCCGAGCC

Downstream 100 bases:

>100_bases
GCCCCGTCGCCTCACCAGCCTAGAAAACGGTTCAAGTCGGCGCGCCGATTTGCGATACGAGAGGCAATCGCAGTTTTGCC
GATGCCAGGAGGATCGCCAT

Product: ATPase AAA

Products: NA

Alternate protein names: AAA ATPase; ATPase-Like Protein; GMP Reductase

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MTVAIEMGQTNSGATAALDLEELLATRLLVQGNSGSGKSHLLRRLLEQSAPWVQQSIIDPEGDFVTLAERFGHLVIDAED
HTERGLQVAGERARIHRVSTVLNLEGLDAENQMRRAAAFLDGMFNTARDHWYPMLVVVDEAQLFAPAVAGEVSDEARKLS
LGAMTNLMCRGRKRGLAGVIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEAFRDLERGQFMALGP
ALSRRPLGLRIGPTETHPRNSTPRLMPLPEAGLEDARAVILAAPPPETTATRPQRRAPAPDLLSQLMAAKSVAIDTTPEP
EAPPLSDEQIAERRERLDRILRAILAEPDAGFRAIGVLYQEFVVRCRIEGLATTIPDMTEFRRMLTHARAGLTTEMAADD
AWQDVTLRASTLPDDMQGVFMIIARAAKEGWPCPGDAAIARAYGTHSLRRARRLLTYIEEQGLIVCQFDGAGRRTVTLVE
LAWATAPGDPNAPDDLPIEDDCRAASA

Sequences:

>Translated_507_residues
MTVAIEMGQTNSGATAALDLEELLATRLLVQGNSGSGKSHLLRRLLEQSAPWVQQSIIDPEGDFVTLAERFGHLVIDAED
HTERGLQVAGERARIHRVSTVLNLEGLDAENQMRRAAAFLDGMFNTARDHWYPMLVVVDEAQLFAPAVAGEVSDEARKLS
LGAMTNLMCRGRKRGLAGVIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEAFRDLERGQFMALGP
ALSRRPLGLRIGPTETHPRNSTPRLMPLPEAGLEDARAVILAAPPPETTATRPQRRAPAPDLLSQLMAAKSVAIDTTPEP
EAPPLSDEQIAERRERLDRILRAILAEPDAGFRAIGVLYQEFVVRCRIEGLATTIPDMTEFRRMLTHARAGLTTEMAADD
AWQDVTLRASTLPDDMQGVFMIIARAAKEGWPCPGDAAIARAYGTHSLRRARRLLTYIEEQGLIVCQFDGAGRRTVTLVE
LAWATAPGDPNAPDDLPIEDDCRAASA
>Mature_506_residues
TVAIEMGQTNSGATAALDLEELLATRLLVQGNSGSGKSHLLRRLLEQSAPWVQQSIIDPEGDFVTLAERFGHLVIDAEDH
TERGLQVAGERARIHRVSTVLNLEGLDAENQMRRAAAFLDGMFNTARDHWYPMLVVVDEAQLFAPAVAGEVSDEARKLSL
GAMTNLMCRGRKRGLAGVIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEAFRDLERGQFMALGPA
LSRRPLGLRIGPTETHPRNSTPRLMPLPEAGLEDARAVILAAPPPETTATRPQRRAPAPDLLSQLMAAKSVAIDTTPEPE
APPLSDEQIAERRERLDRILRAILAEPDAGFRAIGVLYQEFVVRCRIEGLATTIPDMTEFRRMLTHARAGLTTEMAADDA
WQDVTLRASTLPDDMQGVFMIIARAAKEGWPCPGDAAIARAYGTHSLRRARRLLTYIEEQGLIVCQFDGAGRRTVTLVEL
AWATAPGDPNAPDDLPIEDDCRAASA

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55382; Mature: 55251

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAIEMGQTNSGATAALDLEELLATRLLVQGNSGSGKSHLLRRLLEQSAPWVQQSIIDP
CEEEEEECCCCCCCEEEECHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHCCCC
EGDFVTLAERFGHLVIDAEDHTERGLQVAGERARIHRVSTVLNLEGLDAENQMRRAAAFL
CCCEEEHHHHHCCEEEECCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DGMFNTARDHWYPMLVVVDEAQLFAPAVAGEVSDEARKLSLGAMTNLMCRGRKRGLAGVI
HHHHHHHHHCCEEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEAFRDLERGQFMALGP
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
ALSRRPLGLRIGPTETHPRNSTPRLMPLPEAGLEDARAVILAAPPPETTATRPQRRAPAP
CCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCH
DLLSQLMAAKSVAIDTTPEPEAPPLSDEQIAERRERLDRILRAILAEPDAGFRAIGVLYQ
HHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EFVVRCRIEGLATTIPDMTEFRRMLTHARAGLTTEMAADDAWQDVTLRASTLPDDMQGVF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEECCCCCHHHHHH
MIIARAAKEGWPCPGDAAIARAYGTHSLRRARRLLTYIEEQGLIVCQFDGAGRRTVTLVE
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEE
LAWATAPGDPNAPDDLPIEDDCRAASA
EEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TVAIEMGQTNSGATAALDLEELLATRLLVQGNSGSGKSHLLRRLLEQSAPWVQQSIIDP
EEEEEECCCCCCCEEEECHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHCCCC
EGDFVTLAERFGHLVIDAEDHTERGLQVAGERARIHRVSTVLNLEGLDAENQMRRAAAFL
CCCEEEHHHHHCCEEEECCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DGMFNTARDHWYPMLVVVDEAQLFAPAVAGEVSDEARKLSLGAMTNLMCRGRKRGLAGVI
HHHHHHHHHCCEEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEAFRDLERGQFMALGP
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
ALSRRPLGLRIGPTETHPRNSTPRLMPLPEAGLEDARAVILAAPPPETTATRPQRRAPAP
CCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCH
DLLSQLMAAKSVAIDTTPEPEAPPLSDEQIAERRERLDRILRAILAEPDAGFRAIGVLYQ
HHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EFVVRCRIEGLATTIPDMTEFRRMLTHARAGLTTEMAADDAWQDVTLRASTLPDDMQGVF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEECCCCCHHHHHH
MIIARAAKEGWPCPGDAAIARAYGTHSLRRARRLLTYIEEQGLIVCQFDGAGRRTVTLVE
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEE
LAWATAPGDPNAPDDLPIEDDCRAASA
EEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA