| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290438
Identifier: 192290438
GI number: 192290438
Start: 2215773
End: 2216180
Strand: Reverse
Name: 192290438
Synonym: Rpal_2045
Alternate gene names: NA
Gene position: 2216180-2215773 (Counterclockwise)
Preceding gene: 192290439
Following gene: 192290437
Centisome position: 38.58
GC content: 60.29
Gene sequence:
>408_bases ATGACATATCCAATCGCTCAGCTCGATGGCATCACTGAGGTTGCCGCGAGCAAATTGAAATCGGTAGGAATTCGCACCAC CGAAGCGCTGCTCGAAGCCGCACGGACCGTGAAGGGCCGCAAGGCGCTCGCCGCGAAGACCGGCCTCACCGAACAGCAAT TGCTGCAATGGGCCAACCTTGCCGACTGCATGCGGGTTCCCGGGCTCGGCAAGGCGAAGGCCGATCTGCTGCGTGCCGCC GGCGTCTCGACGCTGCGCGAATTCACCCACCGCAATCCGGCGCGGCTGGCACAGAACATGAAAGAGGCCAATCTCAAGCG CAAACTGGTGCGCGCCCTGCCCTCCGAGAAAGAAGTCGGGCAACTGATCGAACAGGCACGCAAGTTGCCATTGAAAATTA CCTACTAA
Upstream 100 bases:
>100_bases TCAAGGCCGGCCGCGACAGAATTGGGGCGGAGAAGATGGGCGCCATCATCGAAGGCACGCCCGGCCTCCGCCAGTTCACC TAAACCTAGTATCGAGTGCC
Downstream 100 bases:
>100_bases GGTCCGGCCCGCCGGCGCAGCCCGCCGCTTGACAGGCTTTCGCGGACCGCGCAAAGCGCTGGCGCATGACCGCCTCCCCT TCGCTGCCCGCATCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Molybdenum Cofactor Biosynthesis Protein; Cytoplasmic Protein
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTYPIAQLDGITEVAASKLKSVGIRTTEALLEAARTVKGRKALAAKTGLTEQQLLQWANLADCMRVPGLGKAKADLLRAA GVSTLREFTHRNPARLAQNMKEANLKRKLVRALPSEKEVGQLIEQARKLPLKITY
Sequences:
>Translated_135_residues MTYPIAQLDGITEVAASKLKSVGIRTTEALLEAARTVKGRKALAAKTGLTEQQLLQWANLADCMRVPGLGKAKADLLRAA GVSTLREFTHRNPARLAQNMKEANLKRKLVRALPSEKEVGQLIEQARKLPLKITY >Mature_134_residues TYPIAQLDGITEVAASKLKSVGIRTTEALLEAARTVKGRKALAAKTGLTEQQLLQWANLADCMRVPGLGKAKADLLRAAG VSTLREFTHRNPARLAQNMKEANLKRKLVRALPSEKEVGQLIEQARKLPLKITY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14803; Mature: 14671
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYPIAQLDGITEVAASKLKSVGIRTTEALLEAARTVKGRKALAAKTGLTEQQLLQWANL CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ADCMRVPGLGKAKADLLRAAGVSTLREFTHRNPARLAQNMKEANLKRKLVRALPSEKEVG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH QLIEQARKLPLKITY HHHHHHHHCCCCCCC >Mature Secondary Structure TYPIAQLDGITEVAASKLKSVGIRTTEALLEAARTVKGRKALAAKTGLTEQQLLQWANL CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ADCMRVPGLGKAKADLLRAAGVSTLREFTHRNPARLAQNMKEANLKRKLVRALPSEKEVG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH QLIEQARKLPLKITY HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA