| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290431
Identifier: 192290431
GI number: 192290431
Start: 2208962
End: 2209219
Strand: Reverse
Name: 192290431
Synonym: Rpal_2038
Alternate gene names: NA
Gene position: 2209219-2208962 (Counterclockwise)
Preceding gene: 192290432
Following gene: 192290430
Centisome position: 38.46
GC content: 58.91
Gene sequence:
>258_bases ATGAAGCAGGTCGGCATTTTCGAAGCAAAGACCCACCTGTCGAGCCTTCTCGACGAGGTTGAAAACGGTGCCGAAGTGAC AATCACACGGCACGGAAAGCCTGTCGCACGACTGGTCCAGGCGAGTAGCGAGCTGTCAGCCGAAGCGATCGCACGACGGC GCCAGGCAATCCGCAATTTGCGCAGCTTGGCGCGCGACCTGAAGCTGAATCCGACACACGACGAGATTAAGAGCTGGATC AACGAGGGCCGGCGTTGA
Upstream 100 bases:
>100_bases CGCCCGCCTCGGCCATTCCAGCCAGGCGGCGGAGTAGCTGTCGACTTCGAAAGATGCCGGCTTAATTGACGAACTAGTCT AACCAGACTAGTTTGTCTGC
Downstream 100 bases:
>100_bases TCGTAATGGACGCATCCGCCGCCCTGGCGATGTTTCTGGATGAGCGCGAGCACCTCGCCAACGATGAGGTGTTTGAAAGT TTGGCGGACCAGCAATTCGT
Product: prevent-host-death family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MKQVGIFEAKTHLSSLLDEVENGAEVTITRHGKPVARLVQASSELSAEAIARRRQAIRNLRSLARDLKLNPTHDEIKSWI NEGRR
Sequences:
>Translated_85_residues MKQVGIFEAKTHLSSLLDEVENGAEVTITRHGKPVARLVQASSELSAEAIARRRQAIRNLRSLARDLKLNPTHDEIKSWI NEGRR >Mature_85_residues MKQVGIFEAKTHLSSLLDEVENGAEVTITRHGKPVARLVQASSELSAEAIARRRQAIRNLRSLARDLKLNPTHDEIKSWI NEGRR
Specific function: Unknown
COG id: COG4118
COG function: function code D; Antitoxin of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9585; Mature: 9585
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQVGIFEAKTHLSSLLDEVENGAEVTITRHGKPVARLVQASSELSAEAIARRRQAIRNL CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RSLARDLKLNPTHDEIKSWINEGRR HHHHHHCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MKQVGIFEAKTHLSSLLDEVENGAEVTITRHGKPVARLVQASSELSAEAIARRRQAIRNL CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RSLARDLKLNPTHDEIKSWINEGRR HHHHHHCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA