| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290430
Identifier: 192290430
GI number: 192290430
Start: 2208555
End: 2208965
Strand: Reverse
Name: 192290430
Synonym: Rpal_2037
Alternate gene names: NA
Gene position: 2208965-2208555 (Counterclockwise)
Preceding gene: 192290431
Following gene: 192290429
Centisome position: 38.46
GC content: 59.85
Gene sequence:
>411_bases TTGATCGTAATGGACGCATCCGCCGCCCTGGCGATGTTTCTGGATGAGCGCGAGCACCTCGCCAACGATGAGGTGTTTGA AAGTTTGGCGGACCAGCAATTCGTTGTCCCGGCGCATTGGCACGCTGAAATCGGCAATGCGCTTGCCACGAACGTTCGCC GCGGCCGGCTTGCTCCCGACAAGCTCGAATACGCGCTGCACAACCTGAAGATTCTCGAGGTGATCACGCAATCACCTCCA GAGCTCGACGATGTCGCCGGCACCGTTCGCAGGGCGCTGGACTCCGGGCTGACCTATTACGATGAACTGTATGTCCGGCT GGCCGAGGTCAGGAACCTGCCGCTCTTCACTTTTGACGGCCAGATGCGAAAAGCGGCGCGCCAGCGCGGCGTTGAAATCC TTCCTGTGTGA
Upstream 100 bases:
>100_bases GACGGCGCCAGGCAATCCGCAATTTGCGCAGCTTGGCGCGCGACCTGAAGCTGAATCCGACACACGACGAGATTAAGAGC TGGATCAACGAGGGCCGGCG
Downstream 100 bases:
>100_bases CGAACGAAGGCCATCTGCGATGATCGACAGACGATCCCGCGCGCGCAAGGAGTCCGACCGTTGAGCTATTCGAACCTGTT CCGCATCGTGCTAGTTCTGG
Product: PilT protein domain-containing protein
Products: NA
Alternate protein names: PilT Protein
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MIVMDASAALAMFLDEREHLANDEVFESLADQQFVVPAHWHAEIGNALATNVRRGRLAPDKLEYALHNLKILEVITQSPP ELDDVAGTVRRALDSGLTYYDELYVRLAEVRNLPLFTFDGQMRKAARQRGVEILPV
Sequences:
>Translated_136_residues MIVMDASAALAMFLDEREHLANDEVFESLADQQFVVPAHWHAEIGNALATNVRRGRLAPDKLEYALHNLKILEVITQSPP ELDDVAGTVRRALDSGLTYYDELYVRLAEVRNLPLFTFDGQMRKAARQRGVEILPV >Mature_136_residues MIVMDASAALAMFLDEREHLANDEVFESLADQQFVVPAHWHAEIGNALATNVRRGRLAPDKLEYALHNLKILEVITQSPP ELDDVAGTVRRALDSGLTYYDELYVRLAEVRNLPLFTFDGQMRKAARQRGVEILPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15331; Mature: 15331
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVMDASAALAMFLDEREHLANDEVFESLADQQFVVPAHWHAEIGNALATNVRRGRLAPD CEEECCHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCCCHH KLEYALHNLKILEVITQSPPELDDVAGTVRRALDSGLTYYDELYVRLAEVRNLPLFTFDG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECH QMRKAARQRGVEILPV HHHHHHHHCCCEECCC >Mature Secondary Structure MIVMDASAALAMFLDEREHLANDEVFESLADQQFVVPAHWHAEIGNALATNVRRGRLAPD CEEECCHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCCCHH KLEYALHNLKILEVITQSPPELDDVAGTVRRALDSGLTYYDELYVRLAEVRNLPLFTFDG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECH QMRKAARQRGVEILPV HHHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA