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The map label for this gene is bepC [H]

Identifier: 192290406

GI number: 192290406

Start: 2184195

End: 2185613

Strand: Reverse

Name: bepC [H]

Synonym: Rpal_2013

Alternate gene names: 192290406

Gene position: 2185613-2184195 (Counterclockwise)

Preceding gene: 192290407

Following gene: 192290400

Centisome position: 38.05

GC content: 68.36

Gene sequence:

>1419_bases
ATGGTTTGGTGGACGAGACTCGTTGGCAGCGCGTATCGCGCTCATCGCTCGGCGTTGACCCTGGGGGTCGCGACGGCGAT
CGGCGTCGCAGCGGCCGGCCCGGTATCGGCCGAAGGACTATCCGACGCGCTGGTCAAGGCTTACCAATCCAATCCGCAGC
TCACCGCCGAACGCGCCCGCCAGCGCGCGACTGATGAGAACGTCCCGCAAGCACTCGCCGGCTATCGGCCGCAGCTTCTG
GCGACACTTGGTGCCGGCCTGCAGCAGGTCCGCAACCTGCTCCCCACCAATACCTACCAGGGCGACACGCTGCGCCCGTG
GACGATCGGCGTCACCGTCACGCAGACGCTGTTCAACGGCTTCCGCACCGCCAACAGCGTGCGGGTCGCCGAGCTGCAGG
TGAAGTCGGGCCGCGAGGCGCTGCGCAACGTCGGCCAGGGCGTGCTGCTCGACGCGGTGACCGCTTATACCAACGTGCTC
GCCAACCAGGCCTTGGTGGCGGCGCAGAAGGCTAACGTCGATTTCCTCAGCCAGACGCTCGACATCACCAAGAAGCGCCT
GAACGCCGGCGACGTCACCCCGACCGACACCGCGCAGGCCGAAGCGCGGCTCAACCGCGGACGCGCCGACCTCAACGCGG
CGGAAGTGAACCTCGCGATCAGCCAGGCCACCTACGCAGCGGTGATCGGCAGTCCGCCGGGCACGCTGAACAATGCCACG
CCGGTCGACCGGCTGCTGCCGAAGAGCCGCGAAGACGCGATCGCGCAGGCGGCGAAGGGCAATCCCGCGGTGCTGGCCGC
GGGCTACGACGTCGACGTCGCTACCACCACCATCAAGGTCGCCGAAGGCGCGCTGCTGCCGACCGTCACGTTGCAGGGCA
GCGCCAGCCGCGCCAGCCAGACCGACTCCACGCTCGGCACCTACGGCACCGACCAGGCATCGGTGATCGGCCAGATCAAC
GCGCCGATCTATGACGGCGGCACAGCGGCGTCGCAGACCCGGCAATCGAAAGAACTTGCGGCGCAGAGCCGCTCGGTTCT
CGATCTGGTGCGCAACCAGACCCGCACTGCCACAATCGGCGCCTGGGTTTCGAACGAAGGCGCCAAGATCGCGGTGAGCG
CCGCGGAGTCCGAAGTCCGCGCTGCCGAAATCGCGCTGCAGGGCGTCAGCCGCGAAGCCCAGGGTGGCCAGCGCACCACC
GTCGACGTACTGAACTCTCAGCAGGATCTGATCCAGGCCAAAGCCCGCCTGATCGGCGCTCAGCGCGACCGTGTGGTCGC
GTCCTACACCCTGCTCAGCGCGATCGGCCGCCTCGACGTCCAGAACCTCGGCCTTAACACCCCGGACTATCTGCCGGACG
TGCACTATCACCAGGTCCGCGACGCCTGGCACGGGCTGCGCACCCCGTCGGGGCAGTGA

Upstream 100 bases:

>100_bases
CAACAACGGCTCTCGGGCCCGGTCGATTGCCTCGCGTTGCACTGCGTTCTACAAACGCGCAGGCATCGCGGGGCGGATGT
CCAGGAGGGCGCGGGACCGC

Downstream 100 bases:

>100_bases
CATCGGATTGCAGGCGGAAGATTGCGCTTGAGTTCCGCCAAGCCTTTCAGGATCGAAGATCCAGTCACGTGCTGAGGCGT
GACCATCCGCAGCGCTTCAA

Product: type I secretion outer membrane protein, TolC family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MVWWTRLVGSAYRAHRSALTLGVATAIGVAAAGPVSAEGLSDALVKAYQSNPQLTAERARQRATDENVPQALAGYRPQLL
ATLGAGLQQVRNLLPTNTYQGDTLRPWTIGVTVTQTLFNGFRTANSVRVAELQVKSGREALRNVGQGVLLDAVTAYTNVL
ANQALVAAQKANVDFLSQTLDITKKRLNAGDVTPTDTAQAEARLNRGRADLNAAEVNLAISQATYAAVIGSPPGTLNNAT
PVDRLLPKSREDAIAQAAKGNPAVLAAGYDVDVATTTIKVAEGALLPTVTLQGSASRASQTDSTLGTYGTDQASVIGQIN
APIYDGGTAASQTRQSKELAAQSRSVLDLVRNQTRTATIGAWVSNEGAKIAVSAAESEVRAAEIALQGVSREAQGGQRTT
VDVLNSQQDLIQAKARLIGAQRDRVVASYTLLSAIGRLDVQNLGLNTPDYLPDVHYHQVRDAWHGLRTPSGQ

Sequences:

>Translated_472_residues
MVWWTRLVGSAYRAHRSALTLGVATAIGVAAAGPVSAEGLSDALVKAYQSNPQLTAERARQRATDENVPQALAGYRPQLL
ATLGAGLQQVRNLLPTNTYQGDTLRPWTIGVTVTQTLFNGFRTANSVRVAELQVKSGREALRNVGQGVLLDAVTAYTNVL
ANQALVAAQKANVDFLSQTLDITKKRLNAGDVTPTDTAQAEARLNRGRADLNAAEVNLAISQATYAAVIGSPPGTLNNAT
PVDRLLPKSREDAIAQAAKGNPAVLAAGYDVDVATTTIKVAEGALLPTVTLQGSASRASQTDSTLGTYGTDQASVIGQIN
APIYDGGTAASQTRQSKELAAQSRSVLDLVRNQTRTATIGAWVSNEGAKIAVSAAESEVRAAEIALQGVSREAQGGQRTT
VDVLNSQQDLIQAKARLIGAQRDRVVASYTLLSAIGRLDVQNLGLNTPDYLPDVHYHQVRDAWHGLRTPSGQ
>Mature_472_residues
MVWWTRLVGSAYRAHRSALTLGVATAIGVAAAGPVSAEGLSDALVKAYQSNPQLTAERARQRATDENVPQALAGYRPQLL
ATLGAGLQQVRNLLPTNTYQGDTLRPWTIGVTVTQTLFNGFRTANSVRVAELQVKSGREALRNVGQGVLLDAVTAYTNVL
ANQALVAAQKANVDFLSQTLDITKKRLNAGDVTPTDTAQAEARLNRGRADLNAAEVNLAISQATYAAVIGSPPGTLNNAT
PVDRLLPKSREDAIAQAAKGNPAVLAAGYDVDVATTTIKVAEGALLPTVTLQGSASRASQTDSTLGTYGTDQASVIGQIN
APIYDGGTAASQTRQSKELAAQSRSVLDLVRNQTRTATIGAWVSNEGAKIAVSAAESEVRAAEIALQGVSREAQGGQRTT
VDVLNSQQDLIQAKARLIGAQRDRVVASYTLLSAIGRLDVQNLGLNTPDYLPDVHYHQVRDAWHGLRTPSGQ

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=438, Percent_Identity=28.5388127853881, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 49727; Mature: 49727

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWWTRLVGSAYRAHRSALTLGVATAIGVAAAGPVSAEGLSDALVKAYQSNPQLTAERAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
QRATDENVPQALAGYRPQLLATLGAGLQQVRNLLPTNTYQGDTLRPWTIGVTVTQTLFNG
HHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHH
FRTANSVRVAELQVKSGREALRNVGQGVLLDAVTAYTNVLANQALVAAQKANVDFLSQTL
HHCCCCEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DITKKRLNAGDVTPTDTAQAEARLNRGRADLNAAEVNLAISQATYAAVIGSPPGTLNNAT
HHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCHHHEEEEEECCEEEEEECCCCCCCCCCC
PVDRLLPKSREDAIAQAAKGNPAVLAAGYDVDVATTTIKVAEGALLPTVTLQGSASRASQ
CHHHHCCCCHHHHHHHHCCCCCEEEEECCCCEEHHEEEEECCCCEEEEEEECCCCCCCCC
TDSTLGTYGTDQASVIGQINAPIYDGGTAASQTRQSKELAAQSRSVLDLVRNQTRTATIG
CCCCCCCCCCCCHHEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
AWVSNEGAKIAVSAAESEVRAAEIALQGVSREAQGGQRTTVDVLNSQQDLIQAKARLIGA
EEECCCCCEEEEECCHHHHHHHHHHHHHCCHHCCCCCCCHHHHHCCHHHHHHHHHHHHCC
QRDRVVASYTLLSAIGRLDVQNLGLNTPDYLPDVHYHQVRDAWHGLRTPSGQ
CHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVWWTRLVGSAYRAHRSALTLGVATAIGVAAAGPVSAEGLSDALVKAYQSNPQLTAERAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
QRATDENVPQALAGYRPQLLATLGAGLQQVRNLLPTNTYQGDTLRPWTIGVTVTQTLFNG
HHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHH
FRTANSVRVAELQVKSGREALRNVGQGVLLDAVTAYTNVLANQALVAAQKANVDFLSQTL
HHCCCCEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DITKKRLNAGDVTPTDTAQAEARLNRGRADLNAAEVNLAISQATYAAVIGSPPGTLNNAT
HHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCHHHEEEEEECCEEEEEECCCCCCCCCCC
PVDRLLPKSREDAIAQAAKGNPAVLAAGYDVDVATTTIKVAEGALLPTVTLQGSASRASQ
CHHHHCCCCHHHHHHHHCCCCCEEEEECCCCEEHHEEEEECCCCEEEEEEECCCCCCCCC
TDSTLGTYGTDQASVIGQINAPIYDGGTAASQTRQSKELAAQSRSVLDLVRNQTRTATIG
CCCCCCCCCCCCHHEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
AWVSNEGAKIAVSAAESEVRAAEIALQGVSREAQGGQRTTVDVLNSQQDLIQAKARLIGA
EEECCCCCEEEEECCHHHHHHHHHHHHHCCHHCCCCCCCHHHHHCCHHHHHHHHHHHHCC
QRDRVVASYTLLSAIGRLDVQNLGLNTPDYLPDVHYHQVRDAWHGLRTPSGQ
CHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]