Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is ykgJ [C]

Identifier: 192290312

GI number: 192290312

Start: 2068934

End: 2069266

Strand: Reverse

Name: ykgJ [C]

Synonym: Rpal_1919

Alternate gene names: 192290312

Gene position: 2069266-2068934 (Counterclockwise)

Preceding gene: 192290313

Following gene: 192290310

Centisome position: 36.02

GC content: 68.47

Gene sequence:

>333_bases
ATGAACGCCCTTCCCCCGATTGAAGCTGAAAACCCGTGCCAGAGCTGCGGCGCCTGCTGCGGCTATTCGGAAAACTGGCC
GCGCTTCACGATCGAGGACGACGCCGCGCTGGACGCGATCCCGGCCGCGCTGGTCAATCAGCGGCTGTCGGGGATGCGCT
GCGAAGCCAATCGCTGTGCTGCGCTGAGCGGGACGATCGGTCAGGCGACCGCCTGCACGATCTACGCGCTGCGGCCCGAG
GTCTGCCGCGACTGCCAGCCCGGCGATCCCGAATGTCTGATGGCGCGGCGGAAGTTCCGGCTCCCGCCGCTTCCCGCCGC
GATCACGGACTGA

Upstream 100 bases:

>100_bases
GGCGCTACTGGCGGCCGCCACGCAGCAGCGGGAATAATGGCTGGTCGATCCGCGCAGGCGGCCGGTTTCGCACCCGGCCG
GAGCGGGATAAAGAGAGGCG

Downstream 100 bases:

>100_bases
GTTCGATCAGTTGGTGGCGTCAGGCGCCGGCTGATCGTCGAGTTCCACATCCGTCTCCTGATCGAGCGGGGCGAAACTGG
CGAGCGGCGCAGTCGAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MNALPPIEAENPCQSCGACCGYSENWPRFTIEDDAALDAIPAALVNQRLSGMRCEANRCAALSGTIGQATACTIYALRPE
VCRDCQPGDPECLMARRKFRLPPLPAAITD

Sequences:

>Translated_110_residues
MNALPPIEAENPCQSCGACCGYSENWPRFTIEDDAALDAIPAALVNQRLSGMRCEANRCAALSGTIGQATACTIYALRPE
VCRDCQPGDPECLMARRKFRLPPLPAAITD
>Mature_110_residues
MNALPPIEAENPCQSCGACCGYSENWPRFTIEDDAALDAIPAALVNQRLSGMRCEANRCAALSGTIGQATACTIYALRPE
VCRDCQPGDPECLMARRKFRLPPLPAAITD

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11830; Mature: 11830

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
11.8 %Cys+Met (Translated Protein)
9.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
11.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALPPIEAENPCQSCGACCGYSENWPRFTIEDDAALDAIPAALVNQRLSGMRCEANRCA
CCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCE
ALSGTIGQATACTIYALRPEVCRDCQPGDPECLMARRKFRLPPLPAAITD
ECCCCCCCCCEEEEEEECHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNALPPIEAENPCQSCGACCGYSENWPRFTIEDDAALDAIPAALVNQRLSGMRCEANRCA
CCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCE
ALSGTIGQATACTIYALRPEVCRDCQPGDPECLMARRKFRLPPLPAAITD
ECCCCCCCCCEEEEEEECHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA