Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192290310

Identifier: 192290310

GI number: 192290310

Start: 2067887

End: 2068273

Strand: Reverse

Name: 192290310

Synonym: Rpal_1917

Alternate gene names: NA

Gene position: 2068273-2067887 (Counterclockwise)

Preceding gene: 192290312

Following gene: 192290305

Centisome position: 36.01

GC content: 64.34

Gene sequence:

>387_bases
ATGGCTGATCCGGTCTCGTTATTTCCCAACCTGTTACAGCCCGCCGCCAAGACCTACGCCCCGATGGGCATCAAGTTCTG
GGAAGGCGAGGCAACCGTCCTCGACAGCATGAAGGAGTTTGCCGACGGCTGGTTTGAGCGCCGACGAATTGGAACCCGCG
CCGCCCTCGAAGCGGCCCGGAGGATCGGCGAAGCGACAACGCCGCTCGATGCGTTCCGCGAGTATCAGGACTGGCTCGGC
GGGGCGACGGCGCGCGTGCTCGAAGACGGCATGGCGTGGCAGCAGCAATTCATGAAGGCCAATGCCAAGCTTGCCCCACA
CCTGCAGAAGAAGGAGGCCCCGAACGAGAGTTCCGCGCCGGCGCCAGAGGATCGACTGAGCGCCTGA

Upstream 100 bases:

>100_bases
TCGTCGTGACGTCGCCATCTAATCGGTTAACTATTCAAGCGCCGCCTTTGAGCGGCTTTCGGTTCAGTGAGTTCGTTCAT
CTTCACGATGGAGAGTACAC

Downstream 100 bases:

>100_bases
GAGCCCGGCCAGACACTCGCAGAGAATGCTGCAGGCCCGCGTCCTGCCCGGGCTTGCCCCGCGGATTCACGTCCGGGAGC
AAAAGTCGCGGAAAGTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MADPVSLFPNLLQPAAKTYAPMGIKFWEGEATVLDSMKEFADGWFERRRIGTRAALEAARRIGEATTPLDAFREYQDWLG
GATARVLEDGMAWQQQFMKANAKLAPHLQKKEAPNESSAPAPEDRLSA

Sequences:

>Translated_128_residues
MADPVSLFPNLLQPAAKTYAPMGIKFWEGEATVLDSMKEFADGWFERRRIGTRAALEAARRIGEATTPLDAFREYQDWLG
GATARVLEDGMAWQQQFMKANAKLAPHLQKKEAPNESSAPAPEDRLSA
>Mature_127_residues
ADPVSLFPNLLQPAAKTYAPMGIKFWEGEATVLDSMKEFADGWFERRRIGTRAALEAARRIGEATTPLDAFREYQDWLGG
ATARVLEDGMAWQQQFMKANAKLAPHLQKKEAPNESSAPAPEDRLSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14223; Mature: 14092

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADPVSLFPNLLQPAAKTYAPMGIKFWEGEATVLDSMKEFADGWFERRRIGTRAALEAAR
CCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIGEATTPLDAFREYQDWLGGATARVLEDGMAWQQQFMKANAKLAPHLQKKEAPNESSAP
HHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCC
APEDRLSA
CCHHCCCC
>Mature Secondary Structure 
ADPVSLFPNLLQPAAKTYAPMGIKFWEGEATVLDSMKEFADGWFERRRIGTRAALEAAR
CCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIGEATTPLDAFREYQDWLGGATARVLEDGMAWQQQFMKANAKLAPHLQKKEAPNESSAP
HHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCC
APEDRLSA
CCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA