Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192290294

Identifier: 192290294

GI number: 192290294

Start: 2047828

End: 2048682

Strand: Reverse

Name: 192290294

Synonym: Rpal_1901

Alternate gene names: NA

Gene position: 2048682-2047828 (Counterclockwise)

Preceding gene: 192290295

Following gene: 192290293

Centisome position: 35.67

GC content: 70.29

Gene sequence:

>855_bases
ATGCTGGCGGCGATGCGGCCCGGTCCTGATCCCACCTCGTCATCCACCTCCCACCGGGCCGGCGCCGCCGTCTCGGTGCT
GGCGCATGTCATGTTGGTCGGCGCAGTCCTGCTGCTTGCCGAAGTTCACCCGTTCGCCGAGGTGCCGGAGCAGCGGATCG
AAGTCGAGGTAGTGACCGCCGACGAAGCCCCGCCGCCGGTGCCGGAAAAGGAGCCCGAGTCGAAGCCCGTCGAGCAGCCG
ACTCCGAATTTCGAGGTGTCGCAGACACCCACGGAGCAGCCCAAGCCGCAGCAACAACAGCCCACGCCCGCCGCCAAGCC
GCAGCCGGCCGAGACCAAGCCTCCGGCTCCCGCTCCGCAGCCGCAGAACGCCCAGGCGCCGGCGCCTCCGCCGCAACCCC
AACCCGCGCCGCCTCAGCCGGCCCCACAGGCGGCGGCTGCGCCCTATCCGCCGGCGATTCCACAGGAGCCGGACATCACC
GTGAAATACTCGGTGGCGCTCGGGCTGCCCGCCGAAGGCGGCTTCGACGCGCCGGCCGAGACCGTCGCCAATATCAGCGC
CGACGCAGTGGCGGCCCTGCGCAAGCGGCTGAAGGCCTGCGCGGCGCTGCCGGCGGGCCTGTCGCCGTCCGACAACGTCA
AAATCGTGATCCGGGTCGGACTGACGCCCGACGGCCGGCTCGCCCAGGAGCCGTTCCTGATCGAGGCCAGCGCCTCGGCC
AAAGGCCCAGCGCTGATGAAAGGCGCTATCGCCGCCCTCGAAGCGTGCCAGCCCTACACGATGCTGCCAGCCGACAAGTA
CCGGGAATGGCGCATCCTCGACATCGGCTTCACACCGCAAGATTTTCGGAGCTGA

Upstream 100 bases:

>100_bases
CTCCGACCTTTCCACACCTCCGCGGCCTGCCGGCGGGGGTGTGACCTCTGATCCACCGCGGGCCGCCAAGAACGACTCCG
CTCCGTCGTCCTGCCGCGCT

Downstream 100 bases:

>100_bases
AGACAGCCCAGCCAGCCAGGCTTTCGACCTCCCGAGATAAAGAAAGCTCCGGAACCGCCGGAGCTTTAAGTCAAGGGAGA
CTCGGCCCACCGCGTCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MLAAMRPGPDPTSSSTSHRAGAAVSVLAHVMLVGAVLLLAEVHPFAEVPEQRIEVEVVTADEAPPPVPEKEPESKPVEQP
TPNFEVSQTPTEQPKPQQQQPTPAAKPQPAETKPPAPAPQPQNAQAPAPPPQPQPAPPQPAPQAAAAPYPPAIPQEPDIT
VKYSVALGLPAEGGFDAPAETVANISADAVAALRKRLKACAALPAGLSPSDNVKIVIRVGLTPDGRLAQEPFLIEASASA
KGPALMKGAIAALEACQPYTMLPADKYREWRILDIGFTPQDFRS

Sequences:

>Translated_284_residues
MLAAMRPGPDPTSSSTSHRAGAAVSVLAHVMLVGAVLLLAEVHPFAEVPEQRIEVEVVTADEAPPPVPEKEPESKPVEQP
TPNFEVSQTPTEQPKPQQQQPTPAAKPQPAETKPPAPAPQPQNAQAPAPPPQPQPAPPQPAPQAAAAPYPPAIPQEPDIT
VKYSVALGLPAEGGFDAPAETVANISADAVAALRKRLKACAALPAGLSPSDNVKIVIRVGLTPDGRLAQEPFLIEASASA
KGPALMKGAIAALEACQPYTMLPADKYREWRILDIGFTPQDFRS
>Mature_284_residues
MLAAMRPGPDPTSSSTSHRAGAAVSVLAHVMLVGAVLLLAEVHPFAEVPEQRIEVEVVTADEAPPPVPEKEPESKPVEQP
TPNFEVSQTPTEQPKPQQQQPTPAAKPQPAETKPPAPAPQPQNAQAPAPPPQPQPAPPQPAPQAAAAPYPPAIPQEPDIT
VKYSVALGLPAEGGFDAPAETVANISADAVAALRKRLKACAALPAGLSPSDNVKIVIRVGLTPDGRLAQEPFLIEASASA
KGPALMKGAIAALEACQPYTMLPADKYREWRILDIGFTPQDFRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29687; Mature: 29687

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAMRPGPDPTSSSTSHRAGAAVSVLAHVMLVGAVLLLAEVHPFAEVPEQRIEVEVVTA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHEEEEEEEC
DEAPPPVPEKEPESKPVEQPTPNFEVSQTPTEQPKPQQQQPTPAAKPQPAETKPPAPAPQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PQNAQAPAPPPQPQPAPPQPAPQAAAAPYPPAIPQEPDITVKYSVALGLPAEGGFDAPAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHH
TVANISADAVAALRKRLKACAALPAGLSPSDNVKIVIRVGLTPDGRLAQEPFLIEASASA
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCC
KGPALMKGAIAALEACQPYTMLPADKYREWRILDIGFTPQDFRS
CCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEECCCCCHHHCC
>Mature Secondary Structure
MLAAMRPGPDPTSSSTSHRAGAAVSVLAHVMLVGAVLLLAEVHPFAEVPEQRIEVEVVTA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHEEEEEEEC
DEAPPPVPEKEPESKPVEQPTPNFEVSQTPTEQPKPQQQQPTPAAKPQPAETKPPAPAPQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PQNAQAPAPPPQPQPAPPQPAPQAAAAPYPPAIPQEPDITVKYSVALGLPAEGGFDAPAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHH
TVANISADAVAALRKRLKACAALPAGLSPSDNVKIVIRVGLTPDGRLAQEPFLIEASASA
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCC
KGPALMKGAIAALEACQPYTMLPADKYREWRILDIGFTPQDFRS
CCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA